Oncorhynchus nerka (sockeye salmon): 115128309
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Entry
115128309 CDS
T07952
Name
(RefSeq) protein argonaute-4 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115128309
03036 Chromosome and associated proteins [BR:
one03036
]
115128309
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115128309
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115128309
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115128309
microRNA pathway
RISC loading complex
115128309
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
ArgoN
PAZ
ArgoL1
ArgoL2
DUF3284
Motif
Other DBs
NCBI-GeneID:
115128309
NCBI-ProteinID:
XP_029513897
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Position
LG4:complement(43299547..43336508)
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AA seq
888 aa
AA seq
DB search
MEALGPDPPIGPPAPPSLFQPPRRPGMGTVGKPIRLLANHFQVQIPKIDVYHYDIDIKPE
KRPRRVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEGK
DQMFKVSLQWVSVVSLQMLLEALSGHNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPP
EGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNINE
QTKPLTDSQRVKFTKEIRGGWGPAGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLE
NGQAMECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNDMTEVTGRVLPAPM
LQYGGRLSTDTGRDCGRGLSPQNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQ
CREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKLTYVGLQLIVVI
LPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPH
QRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQDLSQE
QLYSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKAC
ISLEEDYRPGISYIVVQKRHHTRLFCSDKTERVGKSGNVPAGTTVDSTITHPSEFDFYLC
SHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAF
RARYHLVDKDHDSAEGSHVSGQSNGRDPLALAKAVQIHYDTQHTMYFA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgctcggacccgacccccctataggcccgccggccccgccctccctcttccag
cccccacggaggcctggcatgggcactgtggggaagcccatccgcctgctggccaaccac
ttccaggtgcagattcccaagattgatgtctatcactacgatatcgacatcaagcctgag
aaacggccaaggagggttaacagggaggtggtggacacaatggttcgccacttcaagatg
cagatctttggtgatcgacaaccgggctacgacgggaagagaaacatgtacacggcccat
ccactacccatcgggagagacagggtggatctggaagtaactctgccgggggagggtaag
gaccagatgttcaaggtgtctctgcagtgggtgtcagtggtgagcctgcagatgctcctg
gaggccctgtcaggccacaacgaggtccccgaggactctgttcaggccctggatgtcatc
acccgccacctgccttccatgaggtacaccccagtggggcgctccttcttctcccctccg
gagggctactaccaccccctgggcggcgggagggaggtgtggttcggcttccatcagtcg
gtccgtcctgccatgtggaacatgatgctcaacatcgatgtctccgccactgctttctac
cgtgcccagcccgtgattgagttcatgtgcgaggtgctcgacatccagaacatcaacgag
cagaccaagccactcaccgactcccaacgcgtcaagttcaccaaggagatccgaggtggg
tggggacctgcaggtctgaaagttgaggtcacccactgtggtcagatgaagaggaagtat
cgcgtgtgcaatgtcactcgccgccccgccagccaccaaacgttccccttacagctggag
aatggccaggccatggagtgtaccgtggctcagtacttcaagcagaagtacagcctacag
ctgaaatacccccacctgccctgcctacaagtggggcaggaacagaagcacacctaccta
cccctggaggtttgtaacattgtggccgggcagcgctgcatcaagaagctgacagacaac
cagacctccaccatgatcaaagctacagcacgttctgcacccgacaggcaggaagagatc
agccgactggtcaaaagcaacagcatggtgggcggtcccgacccttacctgaaggagttc
ggaatcgtggtgcataacgacatgaccgaggtgacgggccgagtcctcccagcacccatg
ctgcagtatgggggccggcttagtaccgacactgggcgggactgtggcaggggactctct
ccgcagaacaagacagttgccacgcccaaccagggcgtgtgggacatgcgggggaagcag
ttctacgccgggatcgagatcaaggtgtgggccgtggcctgcttcgccccacagaaacag
tgcagagaggacctgctcaagagcttcacagaccaactgagaaagatctcgaaggatgcc
ggtatgcccatccagggccagccgtgtttctgtaaatacgcccagggagcggacagcgtg
gaacccatgttcaaacacctcaagctgacttatgtgggactgcagcttatcgtggtcatc
ctgcctggcaaaacccctgtctacgcggaggtgaagcgggtaggagacaccctcctgggc
atggccactcagtgtgtccaggtgaagaacgtggtgaagacatccccccagaccctctcc
aacctctgcctcaagatcaacgccaagctggggggcatcaacaacgtcctggtgccccat
cagagaccctctgtgttccagcaacccgtcatcttcctgggggcagacgtcactcaccct
ccagccggcgacggcaagaagccctccatcgcggcggtggtgggcagcatggacggacac
cccagccgctactgtgccacggtgcgcgtgcagacgtcacgccaggacctgtcccaggag
cagctgtacagccaggaggtcatccaggacctgaccaacatggtgcgcgagttgctgatc
cagttctacaagtccacgcgcttcaagcccacccgcatcatctactaccgcggcggcgtg
tccgagggccaaatgaaacaggtggcgtggccagagctgattgccatcaggaaggcctgt
atcagcctggaggaggactaccgacctggcatctcctacatcgtggttcagaaacgccac
cacacccgcctcttctgctcagacaagaccgagagagttggaaagagtggcaacgtccca
gccggaaccacggtggacagcacaatcacccacccctctgagtttgacttctacctgtgc
agccatgctgggatccagggcaccagccggccctcccactaccacgtcctgtgggacgac
aactgcttcacggccgacgagctccagctgctcacctaccagctgtgccacacctacgtc
cgctgcacccgctctgtctccatccccgcgccagcctactacgcccggctggtggccttc
cgcgcccgctaccacctggtggacaaagatcacgacagtgcggagggcagccacgtgtcg
ggccagagtaacggtcgggacccccttgccctggccaaggcagtccagatccactatgac
actcagcacacaatgtatttcgcctga
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