KEGG   Oncorhynchus nerka (sockeye salmon): 115128316
Entry
115128316         CDS       T07952                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115128316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115128316
   03016 Transfer RNA biogenesis [BR:one03016]
    115128316
   03012 Translation factors [BR:one03012]
    115128316
   04131 Membrane trafficking [BR:one04131]
    115128316
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115128316
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     115128316
Transfer RNA biogenesis [BR:one03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    115128316
Translation factors [BR:one03012]
 Eukaryotic type
  Elongation factors
   115128316
Membrane trafficking [BR:one04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    115128316
Exosome [BR:one04147]
 Exosomal proteins
  Proteins found in most exosomes
   115128316
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 115128316
NCBI-ProteinID: XP_029513914
LinkDB
Position
LG4:43496442..43500285
AA seq 462 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGANGVTLLEALDSILPPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAVKAAKAK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactctgggaag
tccaccaccactggccatcttatctacaaatgcggaggcattgacaagcgaaccattgag
aagttcgagaaggaggctgctgagatgggcaaaggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgagagcgtggtatcaccatcgacatttccctgtggaagttt
gagaccgccaagtactacgtcacaatcatagatgcccccggacacagagacttcatcaag
aacatgatcaccggtacctctcaggctgattgcgctgtgctggtcgttgctggtggtgtt
ggtgagtttgaggccggtatctcaaagaacgggcagactcgtgagcacgctctcctggcc
tacactctgggagtgaagcagctcatcgttggcgtcaacaagatggactccacagagccc
ccttacagccagaagcgttttgaggagatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccaccgtcgcctttgtgcccatctctggatggcatggggacaac
atgctggaagccagccctaacatgggctggttcaagggatggaaggttgagcgtaaggag
ggtggcgctaatggtgtgacccttctggaggctctggactctatcctgcccccctcccgc
cccaccaacaagcctctccgtctgcccctgcaggacgtctacaaaattggaggtattgga
acagtgcccgtgggccgtgtggagactggaaccctgaaggccggtatgattgtcaccttc
gcccccgctaacgtcaccactgaagtcaagtctgtggagatgcaccacgagaccctggaa
gcggctctccccggtgacaacgtcggattcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaagaacgaccctccaatggaggccggcaacttc
accgctcaggtcatcatcctgaaccacccgggaaccatctcccagggctatgcccccgtg
ctggattgccacaccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaggccctgaagtctggagacgccgcc
atcatcgtcatggtgccaggaaagcccatgtgtgtggagagcttcgccgcctaccctccc
ctcggtcgttttgccgtgcgtgacatgaggcagaccgtggctgttggtgtcatcaaggcc
gtcgacaagaaggctgccagcactggcaaggtgaccaagtccgccgttaaggctgccaaa
gctaaatga

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