Oncorhynchus nerka (sockeye salmon): 115128317
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Entry
115128317 CDS
T07952
Name
(RefSeq) elongation factor 1-alpha, oocyte form
KO
K03231
elongation factor 1-alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115128317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115128317
03016 Transfer RNA biogenesis [BR:
one03016
]
115128317
03012 Translation factors [BR:
one03012
]
115128317
04131 Membrane trafficking [BR:
one04131
]
115128317
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115128317
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115128317
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115128317
Translation factors [BR:
one03012
]
Eukaryotic type
Elongation factors
115128317
Membrane trafficking [BR:
one04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115128317
Exosome [BR:
one04147
]
Exosomal proteins
Proteins found in most exosomes
115128317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
115128317
NCBI-ProteinID:
XP_029513915
LinkDB
All DBs
Position
LG4:43492670..43496196
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AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASANMGWFKGWKVERKDGNANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
SAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDAPKFLKSGDAAIVDMIPGKPMCVESFQEYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASSGKVTKSAVKAGKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccgggaag
tccaccaccaccggccatctgatctacaaatgcggaggtattgacaagagaaccattgag
aagttcgagaaggaggctgctgagatgggtaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgagagcgtggtatcaccatcgacatttccctgtggaagttc
gagaccggcaggtactacgtcaccatcattgatgcccctgggcacagagacttcatcaag
aacatgatcaccggtacatctcaggctgattgcgctgtgctggtcgttgctggtggtgtt
ggtgagtttgaggccggtatctcaaagaacgggcagactcgtgagcacgctctccttgct
ttcactctgggagtgaagcagctcatcgttggcgtcaacaagatggactccacagagccc
ccctacagccagaagcgttttgaggagatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccaccgttgcctttgtgcccatctctggatggcatggggacaac
atgctggaagccagcgccaacatgggctggttcaagggatggaaggtcgagcgcaaggat
ggtaacgccaatggtgtgactctgctggaggccctggacagcatcctgcccccatcccgc
cccacagacaagccccttcgtctgcccctccaggatgtttacaaaatcggtggtattgga
actgtacctgtgggccgtgtggagacaggcaccctgaaggccggtatgatcgtcaccttc
gcccccgctaacgtcaccactgaagtcaagtctgtggagatgcaccacgagaccctggaa
tcggctatgcccggtgacaatgtcggattcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtagctggagacagcaagaatgaccctccaatggaggctggcactttc
accgctcaagtaatcatcctgaaccaccctggccagatctcccagggctatgcccctgtg
ctggattgccatactgctcacatcgcctgcaagttcagtgagctcaaggagaagatcgac
cgtcggtccggcaagaagcttgaagatgcccccaagttcctgaagtctggagatgctgct
atcgttgacatgatccccggcaagcccatgtgtgtggagagtttccaggaatacccccct
cttggtcgttttgctgtgcgtgacatgagacagacagtcgctgtcggtgtcatcaaggct
gttgacaagaaggctgcctcaagcggcaaggtcacaaagtctgccgttaaggccggtaaa
aagtga
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