Oncorhynchus nerka (sockeye salmon): 115128334
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Entry
115128334 CDS
T07952
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115128334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115128334
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115128334
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
tRNA_bind_3
AHSP
Motif
Other DBs
NCBI-GeneID:
115128334
NCBI-ProteinID:
XP_029513993
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Position
LG1:complement(1664844..1711002)
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AA seq
1189 aa
AA seq
DB search
MIAEPTVTSRSSVHNENLAVDANSSGAVNHTVGGARNENRQKILRGKRRARGGSENAKRR
RTKVTNGSLGRAQNRHLKHGDIEAVTLFEVVTMGRSAMQAVVDDWIEAYITDRDSGLLDL
ISFFIQCSGCKGLVTAEMFQSRQDDVMRKMVEELDEGSGLQYKKFLAFPWILTVTWPMDM
DSGEYPLTMSGPYWRRFRGEFCEFVSVLVTQCQYNVIFDSYLMDTLISLLTELSDSRVRA
FRHTCTLAAMKLLSSLIGVALSLSVSIENSQRLGEVERTKTSGRRNSPRLERIHRKTTEL
QDRRVEIENMMDAIFKGVFLKRYRDVLPEIRSMCMEELAVWMKLYSPVFLTDSYLKYMGW
MMHDKLPDVRLKCVLGLQGLYGDPLLLPKLDLFNSRFKDRMISMTLDKDHEVAVQTLRLL
ILISQSADEVINPEDYKQLFQLVYSSHRPLATTAGELLYTRLLSSPTPAPDLREGASEQD
THTQLTTARVRALLHFYQDSELHQHVVYLVDSLWDCAGAMLKDWSSLTSLLLQDPSTQDA
DLSAGEQSLVVELLVASVRQAVEGPLLAGRSTCKKVVSAREKKSPVDDCGRLTEHFLKVL
PQLLIKYSGSPETVASLLKIPQYLHPDSPNAEFPQALSGLLAEMGAVLELHTDPAVLEAA
ARSYLSLCGEETAWHPLARPGRDAVVQCWADRLAALLGDSLQDGNFTADEEKTGEILSTL
KKLTAFHNAQDLSRWGLHEQVFPLLSVEIIHGGLPTQLTVEALQYVSYSVLWNLNTSRET
LTSREKAVAQRSQMRALCEKCLRCLSHNDQSVKEQAFLSLCDVLTAHNYQLQVWDPSSYG
PLLYTPDPKLQRALLAFILEHVFTGAEYDSHSRGSDVESGEGRLEELHRRRSLLAGFCKL
IVHGVLEMSMAADLFKYYMKYYNNFGDIIKETLSRTRQMDKIESARTLVLCLQQLFLRLK
QEQDSGVTCSSGVQTFSSIKELARRFSLTFGWDQTKSRESLTLIHRDGIEFVFQGFVQRA
EKPSPPYLSYLTILSEFSSKLLRPDKKIVYTYLQRYISEQIISNREECWLPLIYYRASLL
ATGAEGEDAVSFISSDTLKQPSLANRSRSPSVRHSPTADGDMRSPSALTSTETKVRRLHK
ASSSTSPEDRKPEVELGPIAREPPPTIVISEEPFHANEELDVDTVEVDL
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaacctacagtcacctccaggtcctcagtacataatgagaacttggctgtg
gacgcaaactcctctggagctgtcaatcacacagtgggcggagcccggaatgagaacaga
cagaagattttgagagggaagaggagggcacgggggggctctgagaatgccaaacgcaga
cgcaccaaggtaaccaatggcagtctgggtcgggcacagaacagacacctcaaacatggg
gacattgaggctgtcacattgttcgaggtggtcaccatgggcaggagtgccatgcaggct
gtagttgatgattggattgaggcgtacatcacagacagagactctggcctcctggacctc
attagcttcttcatccagtgttccggttgcaaaggtttggtgacagctgagatgttccaa
agcaggcaggatgatgtcatgaggaagatggtggaggaattggatgagggttcgggcctg
cagtataaaaaattcctggccttcccctggatcctcacagtcacgtggcccatggacatg
gacagtggggaatatcctctcaccatgtctggtccgtactggcgccggttccgtggtgag
ttctgtgagtttgtgtcggtgttggtaacccagtgtcaatacaatgtgatctttgacagc
tacctcatggacacactcatctctctgctcaccgagctgtccgactcccgtgtacgagcc
ttcagacacacctgcacattggcagcaatgaagttgctaagctctctgattggagtagcc
cttagtctgagtgtgagtatagagaacagccagagactgggcgaggtggagagaaccaag
acatcaggaagacgcaactcaccaagactggagagaatacacaggaagaccacagagctg
caggatagaagggtggagatagagaacatgatggatgccatattcaaaggagtcttcctg
aagagataccgggatgtgctcccagagatccggtccatgtgtatggaagagctggctgta
tggatgaaactttacagtccagtgtttctgactgacagctacctcaaatacatgggctgg
atgatgcatgacaagctacctgacgtgcgtctgaagtgtgtgttggggctacagggtctg
tatggagacccgctcctcctgcccaaactagacctcttcaacagccgcttcaaggacagg
atgatctctatgactctggacaaggaccacgaggtggcagttcagaccctgagactactc
atactcatctcccagtcagctgatgaggttattaatcctgaggactataagcagctgttc
cagttggtgtactcctcacatcgtcctctggctaccactgcaggagagctgctctacaca
cggctgctcagctcccctactccggcacctgacctccgagagggggcgagtgagcaggac
acacacacacagctgacgacagccagagtgagggctctgctgcacttctaccaggacagt
gagctccatcagcatgtagtatacctggtagacagtctgtgggactgtgctggtgccatg
ctgaaggactggtcatctcttacctcgttactgctacaggacccctccactcaggatgca
gatctgagtgctggagagcagtctctggttgtagagttattggtggcgtcagtgcgtcag
gcagtagagggacccctgctggcgggaaggagcacatgcaagaaggtggtaagtgccaga
gaaaaaaagtctccggtagatgactgtggcagactcactgaacacttcctcaaggtactg
ccacagttgctgattaagtattcagggagcccagaaactgtggcatctcttttgaagata
cctcagtacttacacccagattcgccaaatgcagaattcccacaggctttgtcaggcttg
ctggctgagatgggagctgttttggagctccacactgaccctgcagtgctggaggcggct
gctcgctcatacctcagcctgtgtggagaggaaacagcctggcaccccctggcacgacct
ggcagagacgcagtggtccaatgctgggcagacagattggcagcactgctgggtgactca
ctgcaggatggcaacttcactgctgatgaggaaaagacaggagagattctatccacactg
aagaaactcactgctttccacaatgcccaggacctgtctcgttggggactgcatgagcag
gtctttcctcttctctcagtggagatcattcacggtggattacctacacagctgacagtg
gaagctctgcagtatgtatcttactctgtcctctggaatctcaacaccagtagagaaacc
ctgacctcacgggaaaaggctgtagcccagaggagtcagatgagagcattgtgtgagaag
tgtctacgttgtctgtcccacaatgatcagagtgtgaaggagcaggcattcctgtctctg
tgtgatgtcttgacggcccacaactaccagttgcaagtgtgggatccctcgtcttacggc
cccctgctctacactcctgacccgaaacttcagagggcgctgcttgccttcattctggag
cacgtcttcactggagcagagtacgacagccacagcaggggtagtgatgtagagtctggt
gagggaaggttggaggagctccacagacgtaggagcttattggcaggcttctgtaaactc
atagtacacggggtgctggagatgagtatggctgctgatctctttaagtattacatgaag
tattataataactttggtgacatcattaaggagactctcagcagaacgcggcagatggat
aagatagagagtgctcgcacgctggtgctctgtctgcaacagttgttcctgcgtctgaag
caggagcaggacagtggagtcacctgtagctcaggtgtccaaacattcagcagcatcaag
gagctggccagacgcttctctctcaccttcggctgggaccagacaaagtccagagagtcc
ctcactctgatccatagggacggtatagagtttgtttttcagggctttgtccagagagca
gagaagccctctcctccatacctctcctacctcaccatcctcagcgagttctccagcaag
ctcctcagaccagacaaaaagattgtttacacctacctacagaggtacataagtgaacag
atcatcagtaacagagaggagtgttggctgccactcatctactaccgagcctccttattg
gctactggagctgagggggaagatgctgtgtccttcatcagctctgatacgctaaagcaa
ccgtctctagccaatcgctcacgctctccctctgtcagacacagcccgactgctgatgga
gacatgaggtccccgtctgctcttacctctactgagaccaaagtaaggaggctccataag
gccagcagcagtacaagcccagaggacaggaagccagaggttgagcttggtcccatcgcc
agggaacccccgccgaccatagtgatatcagaggagccgttccacgctaacgaggaattg
gatgtggacactgtggaggttgacctgtga
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