KEGG   Oncorhynchus nerka (sockeye salmon): 115128334
Entry
115128334         CDS       T07952                                 
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
  KO
K06671  cohesin complex subunit SA-1/2
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    115128334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115128334
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    115128334
SSDB
Motif
Pfam: HEAT_SCC3-SA STAG SCD Cnd1 tRNA_bind_3 AHSP
Other DBs
NCBI-GeneID: 115128334
NCBI-ProteinID: XP_029513993
LinkDB
Position
LG1:complement(1664844..1711002)
AA seq 1189 aa
MIAEPTVTSRSSVHNENLAVDANSSGAVNHTVGGARNENRQKILRGKRRARGGSENAKRR
RTKVTNGSLGRAQNRHLKHGDIEAVTLFEVVTMGRSAMQAVVDDWIEAYITDRDSGLLDL
ISFFIQCSGCKGLVTAEMFQSRQDDVMRKMVEELDEGSGLQYKKFLAFPWILTVTWPMDM
DSGEYPLTMSGPYWRRFRGEFCEFVSVLVTQCQYNVIFDSYLMDTLISLLTELSDSRVRA
FRHTCTLAAMKLLSSLIGVALSLSVSIENSQRLGEVERTKTSGRRNSPRLERIHRKTTEL
QDRRVEIENMMDAIFKGVFLKRYRDVLPEIRSMCMEELAVWMKLYSPVFLTDSYLKYMGW
MMHDKLPDVRLKCVLGLQGLYGDPLLLPKLDLFNSRFKDRMISMTLDKDHEVAVQTLRLL
ILISQSADEVINPEDYKQLFQLVYSSHRPLATTAGELLYTRLLSSPTPAPDLREGASEQD
THTQLTTARVRALLHFYQDSELHQHVVYLVDSLWDCAGAMLKDWSSLTSLLLQDPSTQDA
DLSAGEQSLVVELLVASVRQAVEGPLLAGRSTCKKVVSAREKKSPVDDCGRLTEHFLKVL
PQLLIKYSGSPETVASLLKIPQYLHPDSPNAEFPQALSGLLAEMGAVLELHTDPAVLEAA
ARSYLSLCGEETAWHPLARPGRDAVVQCWADRLAALLGDSLQDGNFTADEEKTGEILSTL
KKLTAFHNAQDLSRWGLHEQVFPLLSVEIIHGGLPTQLTVEALQYVSYSVLWNLNTSRET
LTSREKAVAQRSQMRALCEKCLRCLSHNDQSVKEQAFLSLCDVLTAHNYQLQVWDPSSYG
PLLYTPDPKLQRALLAFILEHVFTGAEYDSHSRGSDVESGEGRLEELHRRRSLLAGFCKL
IVHGVLEMSMAADLFKYYMKYYNNFGDIIKETLSRTRQMDKIESARTLVLCLQQLFLRLK
QEQDSGVTCSSGVQTFSSIKELARRFSLTFGWDQTKSRESLTLIHRDGIEFVFQGFVQRA
EKPSPPYLSYLTILSEFSSKLLRPDKKIVYTYLQRYISEQIISNREECWLPLIYYRASLL
ATGAEGEDAVSFISSDTLKQPSLANRSRSPSVRHSPTADGDMRSPSALTSTETKVRRLHK
ASSSTSPEDRKPEVELGPIAREPPPTIVISEEPFHANEELDVDTVEVDL
NT seq 3570 nt   +upstreamnt  +downstreamnt
atgatagcagaacctacagtcacctccaggtcctcagtacataatgagaacttggctgtg
gacgcaaactcctctggagctgtcaatcacacagtgggcggagcccggaatgagaacaga
cagaagattttgagagggaagaggagggcacgggggggctctgagaatgccaaacgcaga
cgcaccaaggtaaccaatggcagtctgggtcgggcacagaacagacacctcaaacatggg
gacattgaggctgtcacattgttcgaggtggtcaccatgggcaggagtgccatgcaggct
gtagttgatgattggattgaggcgtacatcacagacagagactctggcctcctggacctc
attagcttcttcatccagtgttccggttgcaaaggtttggtgacagctgagatgttccaa
agcaggcaggatgatgtcatgaggaagatggtggaggaattggatgagggttcgggcctg
cagtataaaaaattcctggccttcccctggatcctcacagtcacgtggcccatggacatg
gacagtggggaatatcctctcaccatgtctggtccgtactggcgccggttccgtggtgag
ttctgtgagtttgtgtcggtgttggtaacccagtgtcaatacaatgtgatctttgacagc
tacctcatggacacactcatctctctgctcaccgagctgtccgactcccgtgtacgagcc
ttcagacacacctgcacattggcagcaatgaagttgctaagctctctgattggagtagcc
cttagtctgagtgtgagtatagagaacagccagagactgggcgaggtggagagaaccaag
acatcaggaagacgcaactcaccaagactggagagaatacacaggaagaccacagagctg
caggatagaagggtggagatagagaacatgatggatgccatattcaaaggagtcttcctg
aagagataccgggatgtgctcccagagatccggtccatgtgtatggaagagctggctgta
tggatgaaactttacagtccagtgtttctgactgacagctacctcaaatacatgggctgg
atgatgcatgacaagctacctgacgtgcgtctgaagtgtgtgttggggctacagggtctg
tatggagacccgctcctcctgcccaaactagacctcttcaacagccgcttcaaggacagg
atgatctctatgactctggacaaggaccacgaggtggcagttcagaccctgagactactc
atactcatctcccagtcagctgatgaggttattaatcctgaggactataagcagctgttc
cagttggtgtactcctcacatcgtcctctggctaccactgcaggagagctgctctacaca
cggctgctcagctcccctactccggcacctgacctccgagagggggcgagtgagcaggac
acacacacacagctgacgacagccagagtgagggctctgctgcacttctaccaggacagt
gagctccatcagcatgtagtatacctggtagacagtctgtgggactgtgctggtgccatg
ctgaaggactggtcatctcttacctcgttactgctacaggacccctccactcaggatgca
gatctgagtgctggagagcagtctctggttgtagagttattggtggcgtcagtgcgtcag
gcagtagagggacccctgctggcgggaaggagcacatgcaagaaggtggtaagtgccaga
gaaaaaaagtctccggtagatgactgtggcagactcactgaacacttcctcaaggtactg
ccacagttgctgattaagtattcagggagcccagaaactgtggcatctcttttgaagata
cctcagtacttacacccagattcgccaaatgcagaattcccacaggctttgtcaggcttg
ctggctgagatgggagctgttttggagctccacactgaccctgcagtgctggaggcggct
gctcgctcatacctcagcctgtgtggagaggaaacagcctggcaccccctggcacgacct
ggcagagacgcagtggtccaatgctgggcagacagattggcagcactgctgggtgactca
ctgcaggatggcaacttcactgctgatgaggaaaagacaggagagattctatccacactg
aagaaactcactgctttccacaatgcccaggacctgtctcgttggggactgcatgagcag
gtctttcctcttctctcagtggagatcattcacggtggattacctacacagctgacagtg
gaagctctgcagtatgtatcttactctgtcctctggaatctcaacaccagtagagaaacc
ctgacctcacgggaaaaggctgtagcccagaggagtcagatgagagcattgtgtgagaag
tgtctacgttgtctgtcccacaatgatcagagtgtgaaggagcaggcattcctgtctctg
tgtgatgtcttgacggcccacaactaccagttgcaagtgtgggatccctcgtcttacggc
cccctgctctacactcctgacccgaaacttcagagggcgctgcttgccttcattctggag
cacgtcttcactggagcagagtacgacagccacagcaggggtagtgatgtagagtctggt
gagggaaggttggaggagctccacagacgtaggagcttattggcaggcttctgtaaactc
atagtacacggggtgctggagatgagtatggctgctgatctctttaagtattacatgaag
tattataataactttggtgacatcattaaggagactctcagcagaacgcggcagatggat
aagatagagagtgctcgcacgctggtgctctgtctgcaacagttgttcctgcgtctgaag
caggagcaggacagtggagtcacctgtagctcaggtgtccaaacattcagcagcatcaag
gagctggccagacgcttctctctcaccttcggctgggaccagacaaagtccagagagtcc
ctcactctgatccatagggacggtatagagtttgtttttcagggctttgtccagagagca
gagaagccctctcctccatacctctcctacctcaccatcctcagcgagttctccagcaag
ctcctcagaccagacaaaaagattgtttacacctacctacagaggtacataagtgaacag
atcatcagtaacagagaggagtgttggctgccactcatctactaccgagcctccttattg
gctactggagctgagggggaagatgctgtgtccttcatcagctctgatacgctaaagcaa
ccgtctctagccaatcgctcacgctctccctctgtcagacacagcccgactgctgatgga
gacatgaggtccccgtctgctcttacctctactgagaccaaagtaaggaggctccataag
gccagcagcagtacaagcccagaggacaggaagccagaggttgagcttggtcccatcgcc
agggaacccccgccgaccatagtgatatcagaggagccgttccacgctaacgaggaattg
gatgtggacactgtggaggttgacctgtga

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