Oncorhynchus nerka (sockeye salmon): 115128380
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Entry
115128380 CDS
T07952
Name
(RefSeq) tapasin-like
KO
K08058
TAP binding protein (tapasin)
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115128380
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C1-set
I-set
Ig_2
Motif
Other DBs
NCBI-GeneID:
115128380
NCBI-ProteinID:
XP_029514049
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Position
LG4:complement(45434672..45439503)
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AA seq
442 aa
AA seq
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MANISTIYKLSFLAFTYFIQVYGTSCPVLECWFVQEKPGRGGGFPAAMIQEKSLLYINTD
PESEQTKSQQGPSADISHDRVYYITDPAAILCSSSLHPPEGSVHKPQCEINPFMPQPSTV
QWAVPLTDSAHSPIYLQADWYSAALQGLDGQLALSSVMRAPTATKEPTVVLSVSSRTPLV
RSRLGEPVVLDCGFWAEASSPLSGSGFAVEWRYQFRGDGRLVLAYDGKTDRFAETKEKGA
GLDFTALHDTGNASLILQEAEVRHTGTYICTAYLPYLLAQVAVELEIVEPPSLSIFPSPL
PLSVPGQVVKVQCEASGFFPLSLEFYWELTGPDGKVRPLGQGSVTGHRQGPDNTYSQTTR
LELDSAKLDLGRGGEVTCVAVHPGGTRRASVTLNVIGVNGPSIEDSMAMVAVALGLYGLI
KIVSWTFSSGSDDTNSQEKKVK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaatatttcaacaatttacaagctatcgtttctcgcctttacttacttcatacaa
gtctatgggaccagctgtccagttctggagtgctggtttgtccaggagaaaccaggtcga
ggtgggggattccctgctgcaatgattcaggagaagtcactgctgtatatcaatacagac
ccagagagtgaacaaaccaagtcacagcagggaccatctgcagacatcagccatgataga
gtctactacatcactgaccctgcagccatcctctgcagttcctctctgcacccaccagag
ggctcagtccataaaccacagtgtgagataaaccccttcatgccccagccctccaccgtt
caatgggcagtcccgctcactgactctgcccacagtcctatctacctgcaagctgactgg
tactctgcagccttgcagggcctggacggacagctggccctatccagtgtcatgcgtgct
cccacggcaaccaaggaacccactgtggtgctcagtgtgtccagtcgaacccccttggtc
cgttccagactcggggaaccggtggttctagactgtgggttctgggcggaggcctcttct
cctctctctggctcgggcttcgccgtggagtggcgctaccagttcaggggcgatggccgt
ctggtcctggcctacgacggcaagactgaccgatttgccgagaccaaggaaaagggagcg
gggctagacttcacggctctgcacgacacaggaaatgcctcgctgatcctgcaggaagct
gaagtgcgccacacagggacctacatctgcacggcgtacttgccctatctcctggctcag
gtggcagtggagctggagattgtagagcctccgtccctctccatcttcccctccccgctc
cctctctccgtgcccggacaggtggtgaaggtgcaatgcgaggcgtcaggattcttcccc
ctctccctggagttctactgggagttaacagggcctgacggtaaggtcaggcccctgggt
cagggcagcgtgacaggccacaggcagggcccagacaacacctacagccagaccacccgt
ctggagttagactcagccaagctggaccttggccgtggaggggaggtcacctgtgtggcc
gtccatcctggaggcacccggcgggccagcgtcaccctcaatgtcatcggtgttaatggt
ccctccattgaagactccatggcgatggttgccgtggccctggggctctatggtttgatc
aagatcgtctcctggacatttagctctggatccgatgacactaactcacaagagaagaaa
gtgaagtaa
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