Oncorhynchus nerka (sockeye salmon): 115128440
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Entry
115128440 CDS
T07952
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115128440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115128440
Membrane trafficking [BR:
one04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115128440
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
115128440
NCBI-ProteinID:
XP_029514149
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Position
LG4:47088233..47116475
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AA seq
569 aa
AA seq
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MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQSR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLIMDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKELKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSEVEQELACQ
NDHSSASQNVRRLLQNPRVSELDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSERHR
RMVMSMVEYGGKRVRGSDLINPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFVIGGATYEEALAVYNLNRTMPGVRIVLGGTTIHNT
KSFLEEVTLTAGAGQTERVQRAGGHPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcgggcca
ggaatgaaggttctgctcatggataaagagacgaccagcatcgtcagtgtggtctacact
caatccgagatcctacagaaggaggtctacttgtttgaaagaatcgactcacagagtcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgacccaagtacagtgtgtacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggctgaggcggatgaacaggaggtggttgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacaccttttctccctcaac
ctcagtggtgtcgcaaggggtcgtagctgggagccaactctcctaccacgtaccacccag
ggtctgacctcagtgctgttggccctgaagaaatgtcccatgatccgctaccagctgtcc
tcagacatggccaagagactgggagagagcgtgaagcaaatcatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcatggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtgcacgagctgctt
ggcctcaacaacaaccgtattgacctgtcccgagtcccagggatcagcaaggagctgaag
gaggtggtgctgtctgcagagaacgatgagttctatgccaataatctgtacctgaacttt
ggagagatcggcacaaacatcaagaacctgatggaggacttccagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcgtttgtggacaactacccccag
ttcaaaaagatgtctggcacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
ctggtgagcgagaggcacctgatggaggtgtcagaggtggagcaggagcttgcctgccag
aatgaccactcaagcgcgtcacagaatgtgcgtcggctgctgcagaacccgcgggtgagc
gagctggacgcggtgcgcctggtgatgctgtacgcactgcgctatgagagacacagcagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaggcatcgc
aggatggtaatgtccatggtggagtatggagggaagagggtgagaggaagtgacctcatc
aacccccaagacgcagttgccatcaccaaacagttcttcaaggggctgaagggagttgag
aatgtgtacacgcagcatgcaccgttactgcaggagaccttggaccagctgatcaagggg
cggctgaaagacagtcagttcccttacctaggacccagctcccttcgagacaggccacag
gatatcatagtgttcgtcatcggaggggccacctatgaggaggcgctggcagtctacaac
ctgaaccgcaccatgccaggggttcggatcgtactgggcggcaccaccatccacaatacc
aagagcttcctggaggaagtgacattgacggcgggtgcgggccagaccgagagggtgcag
agggcgggtggtcatcccaacagacgctga
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