Oncorhynchus nerka (sockeye salmon): 115128480
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Entry
115128480 CDS
T07952
Name
(RefSeq) teashirt homolog 1-like
KO
K09236
teashirt
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115128480
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115128480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_4
zf-C2H2
zf-met
Zap1_zf1
zf-C2H2_6
Zf-C2H2_ZNF451
Homeobox_KN
DUF760
DUF7410
zf-C2H2_ZNF142_18
Motif
Other DBs
NCBI-GeneID:
115128480
NCBI-ProteinID:
XP_029514202
LinkDB
All DBs
Position
LG4:complement(48362793..48390986)
Genome browser
AA seq
1149 aa
AA seq
DB search
MPRRKQQAPRRSVAYGDEDEFKADDKIDEEHLQDDGLSLDGHDGEYLCNEDDDAGDQFSF
QNSPFSNGTNPDAGYASPLSDTSDQLIDFQSTRSKDGLDKEEAVRGGVDHLKIPNGLSLQ
DSLAQMKAVYANLISDASWSSITKDMLRSNSNSNKVISVISNSNGSSHKGSNGIANSNTI
RLVNNNNHTNSSSNTSAPTNTTSNTTATSTANTNNNGTGVSTGSTGGVTYDWHQAALAKT
LQHTPYNLLPEPSLFSTVQLYRQNNKLYGPVFTGASKFRCKDCSGAYDTLVGLTVHMNES
GHYRDDNKDKEEERGKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK
TKHYQKVPLKEPMPALTSKLVPPTRKRAFQDLVSPCSPESVHNTPGVHLGETTKDQKVVN
PYVTANNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTNT
ASKKGKQLVFDPLVEEKMQSIPLPPTSTRLPAPNVKSQPDSLLLHSSHTEEKREEHEEKM
EMSEPENKIKEEKEDLTEKSEKTGKAGHYKYLTEEDLEETPKGGLDILKSLEFTVSSAII
KAQTGTPTWGGAGYPSIHAAYQLHGSLKSSMQSVQVVQPLFSTSSLKVMSSDSSNLIHSP
ISHSPPPSHKNNVLAMEELVEKVTGKVSVKKEKDEKASENKCKVSSTKSPSPLSKERKGS
PMPDSLNKPVKNIDVEDKSEPRSREGEAKDGKADPPMKNGADVPKTVASNGCNGLGIITD
HSPEQSFVNPLSALQSIMNNHLGKASKTATPFLDPLAMLYKISNNMMEKPMNNSNQVKQV
ESINRFYDNDDQPMDLTKSKNTNGRTTNSTSTTPNNNSNCNTNNGNRPILSSLSESLSSP
LRENALMDISDMVKNLTGRLTPKSSTPSSISEKSDADNSAFEDGLEELSAFQKRKGRQSN
WNPQHLLILQAQFTSCLRETADGKFVMTDLGPQERVHICKFTGLSMTTISHWLANVKYQL
RRTGGTKFLKNIDSGQPLFLCSDCASQFRTPSSYINHLESHLGFSMKDISKLSIDHLREQ
QAVTRMITEKTFSSLGLNEEDSCSVFQCKLCNRTFVSKHAVKLHLSKTHGKSPEDHLIFV
TELEKFDKA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggagaaagcagcaagcgccaaggcggtccgtagcttatggggacgaggacgaa
tttaaggctgatgacaagatcgatgaggagcacctgcaagatgatgggctctccttggat
ggacatgatggcgagtacctctgcaacgaggatgacgatgccggggaccaattcagcttc
cagaactcccctttcagcaatggcaccaaccccgacgctggctacgcttctcctctcagc
gataccagcgaccaacttatcgacttccagagcacacgctccaaggacggactggataag
gaggaggcagtcagaggaggagtagaccacctaaagatccccaatggcctgtctctgcag
gacagcctggcgcagatgaaagctgtctatgcaaacctgatctcggacgcctcttggtcc
agcatcaccaaggacatgctaagaagtaacagcaacagcaacaaggtcatcagtgtgatc
agcaacagcaatggaagcagccacaaggggagcaacggtatcgccaacagtaatactatc
agacttgtgaacaataataaccacaccaacagcagcagtaacacctctgcccctaccaac
actaccagcaacactaccgctacaagcaccgctaacactaacaacaatggcactggtgtc
agcactggcagcaccggtggagtgacctacgactggcaccaagcggctttggccaaaacc
ctgcagcatacaccatataacctcctccccgagccgagcctcttcagcactgtgcagctg
taccggcagaacaacaagctctacggtccggtgttcaccggtgccagcaagttccggtgc
aaggactgcagcggagcctatgacacgctggtggggctcacggtacacatgaatgagtca
ggccactaccgtgatgacaacaaggacaaggaagaggagcggggaaagaggtggtccaag
ccacgtaagcgctccctcatggagatggaaggcaaggaggacgctcaaaaggttctcaag
tgcatgtactgcggccattcctttgaatccctacaggacctgagtgtccacatgatcaaa
acaaaacactaccagaaagtgcctctcaaagaacccatgccagccctcacctcaaagctg
gtgccacctaccagaaaaagagcatttcaggacttggtgtccccgtgctcaccagagtct
gtccacaacacacctggtgtacacctgggggagaccacgaaagaccagaaagtggttaac
ccctatgtcacagcgaataaccgctacggctaccaaaatggcgccagttacacctggcag
tttgaggctcgcaaggcccagatcctcaaatgcatggagtgcgggagttcccacgacacc
ctgcaacaactgacagcccacatgatggtcacaggacactttttgaaagtgaccaacaca
gcgtccaaaaaggggaagcagttggtgtttgaccccctggttgaggaaaagatgcagtcc
attcctctcccgccgacctctacacgactccctgcgcccaatgtgaagtcacagcccgat
tctcttctcctgcactcctcgcacactgaagagaaaagggaggaacacgaggagaaaatg
gagatgagtgaaccagagaataagatcaaagaagagaaagaggatctgactgagaaaagt
gagaaaactggcaaggctggacattacaagtatctcacagaggaagacctggaagagaca
cccaaaggaggtctggatatcctgaagtccttagagttcacagtgtcaagtgcaatcatc
aaggcccagactgggacgcccacctggggtggtgctggctaccctagcatccacgctgcc
taccagctccatgggtctctgaagtcctccatgcagagtgtccaggtggttcaacccttg
ttcagcactagcagcttgaaggtgatgtcctctgactccagcaatctgatccattcaccg
atcagccattccccacctccaagccacaagaacaatgtgctggccatggaggagctagtg
gaaaaagtcacagggaaggtctctgtgaagaaggagaaggacgagaaggcgtcagaaaac
aaatgcaaagtgagctctaccaagtcaccatccccactgtccaaggagaggaaggggtca
cccatgccggatagcctcaacaagccggtgaaaaacattgatgtagaggataagagtgag
cctagaagcagagagggagaggcaaaagacggcaaagcggatccgccaatgaagaacgga
gcagatgtgccaaaaacggtagccagcaatggctgtaacggcttgggaatcatcacggat
cattcacctgagcagtcatttgtcaaccccctcagtgcgttgcagtcaatcatgaacaat
cacttgggaaaggcctcgaagacagccaccccctttctagaccctctggcaatgctgtac
aagatcagtaacaacatgatggagaagcccatgaacaactccaatcaggtcaagcaagtt
gagtcaatcaatcgattctatgacaatgatgaccaacccatggacttgacaaaatccaaa
aacacgaatggacgcactactaacagcacctccactacgccgaacaacaatagcaactgt
aacaccaataacggcaacaggcctattctgtcaagcttgtctgaatctctctcgtcccct
ttacgggaaaatgctttgatggacatctccgacatggtcaagaacctgaccggccgtctg
acaccgaaatcctccaccccatcctccatctctgagaaatctgacgcggacaacagcgcc
ttcgaggatggcttggaggagctctctgcattccagaaaaggaaaggccggcagtccaac
tggaatcctcagcacctcctcatccttcaggcccagttcacctcctgtctccgggagacg
gctgacggcaagttcgtcatgactgacttaggcccccaggagcgggtccatatctgcaag
ttcactggtctctccatgaccacgatctcccattggctggccaatgtcaagtaccagctg
aggcggacaggcgggacaaaattcctgaaaaacattgactcgggccagcccctgtttctc
tgcagtgactgtgcctctcagtttaggactccttcctcttacataaatcatttggagtcc
cacttaggcttcagcatgaaggacatctcaaagctttccatagatcaccttagagagcag
caggcagttaccagaatgataacggagaaaacgttcagttccctgggacttaatgaggaa
gactcatgctctgtatttcagtgcaagctgtgcaatcggacctttgtcagcaagcatgca
gtcaaactgcaccttagcaaaacgcatggcaagtctccggaggaccacctcatctttgtc
actgaactagaaaagtttgataaagcataa
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integrated database retrieval system
