Oncorhynchus nerka (sockeye salmon): 115128512
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Entry
115128512 CDS
T07952
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115128512
09144 Cellular community - eukaryotes
04530 Tight junction
115128512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115128512
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
115128512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
115128512
NCBI-ProteinID:
XP_029514267
LinkDB
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Position
LG4:50294682..50333912
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AA seq
446 aa
AA seq
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MNRSFNKSQSSLQYFDCIAVEVKSKYGAEFRRFSVDRFKPGKFEDFYKLVMHVHRIANME
VMIGYADIHGDLLPINNDDNFCKAVSTAHPLLRVFIQRQEEVDYSSYGTHSLTRKKKAVV
ALRNDVNRKRPHIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
VRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVTGKTLDQVTDMMIAN
SHNLIVTVKPVNQRNNVVRASRISGSSGQSSDSSGSTGYPSLSTAAMATGAHGYPDELES
DEESDIVIESTLKRPSRRSSASMVSVASRTSRSHTQAPPQAPVEPTNPPTRPLSVVSTSS
SHSQPSLNGLSHHGSLSYMLHRDLNLQQPQLQNPQHHQIQHHSSNPALRESNSSLHKILS
TMRTDPRHSLALPRGGVEEDGTVITL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagttttaataaatcccaatcttccctgcaatattttgattgcatcgcggtt
gaagtgaaaagcaagtatggagcagagttccggcgattctccgtggaccggttcaaaccg
gggaagttcgaggacttctataagctcgtcatgcacgttcaccgcatcgccaacatggag
gtcatgattggctacgctgacatccacggagacctgctgccaatcaacaacgacgacaac
ttctgcaaggcggtgtctacggcccacccactgctccgggtcttcatacagagacaagag
gaggtcgactacagcagctatgggactcactctctgacccgaaagaagaaggctgtggtg
gcgctgcggaacgacgtcaacaggaagcgacctcacatccgtattggcatgccgcaggac
ttccggccagtctcctccatcatcgatgtggacatcttgccagagtcccaccgccgcgtt
cgtctctaccgccatggttctgacaaacccctggggttctacatccgggatgggacaagc
gtacgagtgacgccccatggcctggagaaggtgcctgggatttttatctcccgcatggtg
cctgggggcctggctgagagcacgggcctgctggccgtcaatgacgaggtcctggaggtc
aacggcattgaggtgactgggaagacgctagaccaggtaacggacatgatgatcgccaac
agtcacaacctgattgtcacagtgaagccggtgaaccagcggaacaatgtggtgcgagcc
agccggatatccggcagctccggtcagtcgtcagacagcagcggttccaccggctacccc
agcctgtccaccgcagcaatggcgaccggtgcccatggctaccccgacgagctggaaagc
gatgaggagtcagacatcgttatcgagagcaccctcaagcggccgtcgaggcgctccagc
gcatcaatggtgtccgtggcttcaagaacgtcacgctcccatacccaagcccctccccag
gcccccgtggaacccaccaaccccccgacccgacccctctctgtggtttccacctcctcc
tcccactcccagcccagcctcaatggcctttctcaccacggcagcctcagctacatgctg
cacagggacctgaacctccagcagccccagttacagaacccgcagcatcaccaaatccag
caccacagcagcaacccagccctccgggagagcaacagcagcctgcacaaaatcctcagc
accatgaggacggaccctcgacacagcctggctctgccccggggaggggtggaagaggat
ggcaccgtcatcaccctataa
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