Oncorhynchus nerka (sockeye salmon): 115128541
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Entry
115128541 CDS
T07952
Name
(RefSeq) transcription factor HIVEP3-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115128541
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115128541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_16
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
115128541
NCBI-ProteinID:
XP_029514317
LinkDB
All DBs
Position
LG4:complement(52226970..52249005)
Genome browser
AA seq
2093 aa
AA seq
DB search
MEALHSCSHLPTGEQSSGHDQPQPEESALPLADPEPPKSPSSQNNQLQTQQTRSKQGGPQ
HQQHHKLPNKRERKRLRHQRQSVDSDTPLLEEGKHATAEATQTRVSRTPSGGTPATPSLS
TTSTQSTEAPVTEENQEGTLKQKREHKPGKPGKYVCSYCGRACAKPSVLQKHIRSHTGER
PYPCAPCGFSFKTKSNLYKHRKSHTHRVKAGLASGEPRALEEPMPVSEDETRQPSSAASS
ILERHGSVANEKMLEDTERSKEQSSGMDNSYAVKKRLALRLSRGKRGPLGSSDSISSSLG
MASIGSRGSTESGYFSRSESTEQSQDIPPNATSAKSYAEIIMGKYGRLGHLQRMSRHQDQ
QPSGSQGQQEKSSPFTVPKKQVIDHITNLITINEAVVDTSKIDSVKPRRFSLPRRSSNES
CSKVTLSLKETPVVHHSTKNPGDPGFKSSGSITMGVPCEKFHHHQSLHVDSTAGLSPTSM
APLLRSLSMPSAASSTDASSDVFPRNFRLSQSFDERSETQSRRTGMLRRQPAIELQPRAE
LTKEEHSLHSSSNTLYNHNMSTVPPDHKQCQPEPYECETCGVGCKNWEGYKAHKRSLCIA
RLPQESLGTTICQLDRSQLIHYPISKPGALAMRKRRKEESFESDDPSSPVSLSIPTFSTS
VQGRDRKSVACNRNSWPWVEQERGDTSKCFSVIQHTSSFEKQDPLFTDSQGKEEAHFSFQ
SHEDVTQKQLQEHSSKPTPRKLVRQHNVQVPEIFITEDSNTNVIESVQTQSETTSIMPKQ
TERTEEFQWPQRSLTLSGVPIEKLPPKKKRIRLAEAAQSSGESISSFDSISLPRSPSQDS
CASHASSRSASFEESTRPGDMETLAGTPLRRSRAPNMLTVPGLHLHKREMRRSVSEQAPH
DPQQQSVLMAMLEMRSKSFDYSSLSPERSAAGWSDRRKCLLMRHTAVKDPEEEQPAKPAE
LKRNPSSSISAKHTALKVNNPSHCSPSPDPVSPSTSSKLSPGPRHLSATAGSPLSGEPTS
CNPVQTLCQEPPSQWKLGQSIHLTGHCSEVLPSKNSVESPDRLQRVDPSPLCSGKPLIIS
LRPVHTYIHPAQPQPRPVYPPHPLSTQCPLGIARAHYLPMSTGLKLEIPVPIHSHDGPSE
FVTHRPQILHPHPNISRSPELLRPSISPAVAVVRLQADTNTLASAIYTTLSQTTTSRSQE
PVCSGLNSGHRNSPMPEHNSHLVMSLPVSSKMLSGTLLPVSQLALPPGNHLALPLPSGSQ
LWSDEGCRSPGSGSNKRLLSPSNSVDFSPESKQQQKRVKEEEEEESCVGNIIVETSTKEE
KVEIPTCLPRVCTPISPERPSYPTLQSTTSHSWCYLNYIKPNPSTSTSTDHQPSVYSSWS
TSEYDPNPPGLSSKTALSLLDCKQRVCPTIYTMSPMSSTPAETPPEPTGMKTPCHSEVHA
TLPGDSHRVETTEQEQSAEDKELKKEREEEEEKEEEEKESETQSTSKCREPPTRIWICEG
GYRSSEEYVYVRGRGRGRYVCEECGIRCKKPSMLRKHIRLHTDSRPYVCKHCNFAFKTKG
NLTKHMKSKAHGKKCHDGPMTGSEAEEETGQDISETEADDDDNEYDDEDDDDGEEESWSH
EDPSTTSTSHLKPPKPPDQNRTTPDQDRPRPSGSSQPSQPQRLNPQEPSLCYPAGSPSKK
RALFSRRRHLDPCGHHSPLHCPSPTPALSPSLSLTNQLCPAHSLSPRADLAPLRCPSPKR
YLSPVSCHPSPPPLSSLFPRHNLSTAPSHPSPPSSLSLLGCHVSPSLERHPSPLRGLSPV
RPKSPSSPSPQATIPAQHRACLPRDPSSNPHRDRSATATSSKARLLKSYSVQEDDEVRLP
LLSPRTRPSRGGHVGVLSHLPLHSQQLARTPNLMIPIGGIHMVQPRTSRHYSLVNSPVAS
QNTPTPAKMDRSMAAQNTPTPAEMDHFRTRGAGLEEGPLSRPSSLKNHQNPLKEAAGPST
SMHTRYQDNRVGEGEAEGRLSGPLPDKAGTAHLQVCSMRPENHGSLSQREETKLLFTGTE
LGGSSHSPGAQTSTLSKGTTHTERDTDTHVRGGSLFPVTKQGQKMPSSFQTKL
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgttgcacagctgcagccacttgccgactggggagcagtccagtggtcatgac
cagcctcagccagaagagtctgctctgcctctcgcagaccctgagcctcccaaatctccc
tcctcccagaacaatcaactgcagacacaacagactcgctccaaacaaggaggccctcaa
catcaacaacaccacaaactgcctaataagagggagcgcaagcgtctccgacatcagagg
caaagtgttgattcagacaccccactgttggaagagggtaagcatgcaacggcagaggca
acacagactagagtgtcacggacaccgtctggggggaccccggcaactccctccttatca
accacctccacccaatctacagaggctcctgtcacagaggagaaccaggagggcaccctg
aagcagaaacgggagcataagcctggaaaacctgggaaatatgtgtgttcttactgcggc
cgtgcctgtgccaagcccagcgtcctgcagaaacacatccgatcccacactggagagagg
ccctacccctgtgctccctgcggattttctttcaagaccaagagcaacctctacaagcac
cggaagtcccatacccacagggtgaaggccggcctcgcctctggagagcccagggcttta
gaagaacctatgcccgtgtcagaagatgaaaccagacagccatcgtctgctgcctcctct
atcttggagagacatggcagtgtagccaatgagaagatgcttgaagacacagagaggtct
aaagagcagtccagtgggatggacaactcatacgccgtcaagaagaggctggccctgcgt
ttgagccgagggaaacgtggccctctaggctcgtctgactcgatcagttcctcgttgggt
atggcgagtatagggagcagaggcagcacagagtctggctatttctctcgctctgagagc
actgagcaatcgcaggacatcccacccaatgcaacaagtgccaaaagctacgcagagatc
atcatggggaaatatggccgcctgggccacctccagaggatgtcccggcatcaggaccag
cagccttctggaagccagggacagcaggagaagagcagcccgttcacagtgcccaagaag
caggtcattgaccacatcaccaacctcatcaccatcaacgaggctgtggtggacacaagt
aagatagacagcgttaagcccaggaggttctctctgcctaggagaagtagcaatgagtct
tgctctaaggttactctatctctgaaagagacaccggtagtccaccacagcaccaaaaac
cctggagacccaggatttaagagcagtggttccatcactatgggagttccgtgtgagaag
ttccatcatcaccagtcactacacgtggattcaacggcaggcctgtcacccacttccatg
gctcctcttctgagaagcctctctatgccctctgctgctagttcaactgatgcctcctct
gacgtcttcccacgaaacttccgccttagccaatctttcgatgaacggtctgaaacacag
tctcgccgcactgggatgctacgacgccagcctgctatcgaactacaacccagggctgaa
ttgactaaagaggaacatagtttacacagtagctccaacacactctacaatcacaatatg
tccaccgtgcctcctgatcacaagcaatgtcaaccagagccgtacgagtgtgagacctgt
ggcgttggatgtaagaactgggaaggttataaggcacacaagagaagtctttgtatagca
cgacttccccaagagagtcttggtacaacaatatgccagctggaccgttcacagttgata
cactatccgattagcaaaccaggggctttggcaatgcgcaagagaaggaaagaggagagt
tttgaatctgatgatccatcctctcctgtgtctttatccatacccaccttctccacgtcg
gtgcaaggcagagacagaaaaagtgtagcatgcaatagaaactcatggccatgggtagag
caggagcgtggagacacatcaaaatgtttctcagtgattcagcatactagttcatttgag
aaacaggaccctttgtttacagacagtcaaggtaaagaggaggcgcattttagttttcaa
tctcatgaggatgtgactcagaaacaactgcaggaacactcgtccaaaccaacacctcgc
aaactggtgcggcaacacaatgttcaagtcccggagatattcatcactgaggattccaac
accaatgttattgagtctgttcagacacagtcagaaacgacatccataatgcctaaacag
actgagaggacagaagagttccagtggccacagaggagcctcaccctgtctggggtcccc
atcgagaagctgcccccgaagaagaaacgtattcgtctggccgaggccgcccagtcttca
ggggagtccatatccagctttgactccatctccctgcctcgcagccccagccaggacagc
tgtgcatcccacgcctctagccgctctgcatccttcgaggagtccaccagacctggagac
atggagaccctggctgggacaccattgaggaggtctagggcccctaacatgttgaccgtc
ccagggctgcatcttcacaaaagggagatgcggcggtcggtctcagagcaagcacctcac
gacccacagcagcagtctgtcctgatggcgatgttggagatgcgaagcaagtcctttgac
tacagcagtttgtcccctgagcgctccgcggccggctggagtgacagacgcaaatgtctc
ctcatgagacacactgcggtcaaggacccagaggaggagcagcctgccaaacctgcagaa
ctaaagcggaaccccagttcctccatttctgccaaacacacagcactaaaggtgaacaat
ccttctcactgtagccccagtcctgaccctgtcagtcccagcacttcttccaaactaagc
ccaggtcctcgacatcttagtgcgactgctggttcccctctgtcaggagaacccacatca
tgtaaccctgtacaaactctttgccaagagcccccctcacaatggaaactgggtcaaagt
attcatttgactggacattgctctgaagtcctaccgtcaaagaactctgtagaatctcct
gaccgcctccagagggtagacccatcacctctctgttcagggaaacctctaattatctcc
ctccgtcctgtccacacctacatccatcctgcccaaccccaaccccgtcccgtctaccct
ccccaccccctctccacccagtgcccattagggatagctagggcccactaccttccaatg
tccacaggcctgaagctggagataccagtcccaattcacagtcatgatggaccttcagag
tttgtaacacatcgtccgcagatcctccaccctcaccctaacatctcacgtagcccagag
ttactccggccctctatatcaccagcagtagcagtagtccggctacaggcagacaccaac
accctagccagtgccatatacaccactctgtcccaaaccacaacatctaggtcccaggaa
cctgtgtgttctgggttaaacagtggccatagaaattccccaatgcctgaacataacagt
cacctggtcatgtctctgcctgtaagtagcaagatgttgtctgggactctgctaccagtc
agccagttggctctgcctccaggcaaccacttggctttgcctctgccttcaggcagccag
ttgtggtctgatgagggctgtagatctccgggctcagggagcaacaagcgattgttgtcc
ccttcaaacagtgtcgatttcagccctgagtccaaacagcagcagaagcgagtgaaggag
gaggaagaagaggagagttgtgtaggaaacataatcgtggaaacatccacaaaagaagaa
aaggttgagattccaacatgtttaccgagggtgtgtactccaataagtccagaaagacct
tcatatccgaccctccagtccaccacctctcacagctggtgttatctgaactacatcaag
ccaaacccctccacctccacctcgactgaccaccagccctcagtgtactcctcttggtct
accagcgagtatgaccccaaccctccaggcctctccagcaagacagccctgtccctgttg
gactgcaagcagagggtctgccccaccatctacaccatgtctcccatgtcatccaccccg
gcagagaccccaccagagcccaccggcatgaagacgccatgccattctgaggtacatgcc
actctgcccggcgacagccaccgtgtcgagacaacagagcaagagcagtccgcagaggac
aaggagctaaagaaagaacgagaggaggaggaagagaaggaagaggaggaaaaagaatca
gagacccagtcaaccagcaaatgtagagaacctccaactcgaatctggatctgtgaggga
ggctacaggtcgagtgaggagtacgtgtacgtgcggggtcgaggcaggggcagatatgtg
tgtgaggagtgtggcatccgctgtaagaagcctagtatgctgcgtaaacacatccgcctg
cacaccgactcacgaccctacgtctgcaagcactgcaacttcgccttcaaaaccaaaggg
aacctcaccaaacacatgaagtccaaggcccatggtaagaagtgccatgatgggccaatg
actggttctgaggcagaagaagagacaggacaggacatcagcgaaactgaagcagacgac
gatgacaacgagtatgatgatgaagatgatgatgatggtgaagaggagtcctggtcccat
gaagacccttccaccacctcaacaagccacttgaagccacccaaacccccagaccagaac
agaaccacaccagaccaggacaggcccagaccatctgggtcaagccagcccagccagcct
cagaggctgaatccccaggagccaagcctctgttaccctgctggttcccccagcaagaag
agagctctattctctcggaggaggcacctggacccctgtggtcaccactccccattgcac
tgtccatcaccaactccagccctgtctccatccctatccctaaccaatcagctttgtcct
gctcactccctatcccctagagcggacctggcccctctccgatgcccttcccccaagcgt
tacctctcccctgtctcctgccatccctcccctccacctctctcatccctgtttcctagg
cataacctgtccactgccccctcccacccctccccaccctcctctctgtccctgctaggg
tgtcatgtctccccctccctagagagacatccgtcccccctaagaggcctctcgcctgtc
aggcccaagtcccccagctccccttcccctcaggccaccatccctgctcaacacagagcc
tgtctgcccagagacccatcttcaaatccccacagggacagatctgctacggctacaagc
tccaaggcaaggctgctgaagagctactctgttcaggaggacgatgaggtgcgtctccct
ctcctgtcccccaggactagaccatcccgagggggccacgttggtgtcctcagccacctg
cctctccactctcagcagctagccaggacccccaacctgatgatccccattggggggatc
cacatggtacagcccaggaccagtcgtcactacagcctggtgaatagccctgtggcatca
cagaacacccctaccccggcaaagatggaccggtccatggcagcccagaacacccctacc
ccagcagagatggaccacttcaggaccaggggagctggactggaagaagggccacttagt
aggccttcatcgctgaagaaccatcaaaaccctctgaaagaggcggctgggcctagcaca
agcatgcacaccagataccaggacaacagggtaggagagggagaggccgagggcagactt
tcaggacctctcccagacaaggcaggtacggcccatttacaggtgtgctccatgagacct
gagaatcatgggagtttgagtcaaagggaagaaactaaactactgttcactgggacagag
ctaggaggcagctcacacagtccaggtgcccaaacgagcactttgtccaagggaaccaca
cacacagaaagagatacagatacacacgttagaggagggagtctttttccagtgactaaa
caaggccaaaagatgccatcttctttccagactaaactctga
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integrated database retrieval system
