Oncorhynchus nerka (sockeye salmon): 115128561
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Entry
115128561 CDS
T07952
Name
(RefSeq) DNA topoisomerase 2-beta-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
one03032
]
115128561
03036 Chromosome and associated proteins [BR:
one03036
]
115128561
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
115128561
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Topoisomerases
115128561
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
115128561
Centrosome formation proteins
Centriole proteins
115128561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
115128561
NCBI-ProteinID:
XP_029514347
LinkDB
All DBs
Position
LG4:complement(53971219..54002011)
Genome browser
AA seq
1669 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKKNAAKKREEEAAAAAAAANGRGDGGKAEGGGGGAKKKGGDK
MSVERVYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDLGMNLREITYVPGLYKIFDE
ILVNAADNKQRDKSMSTIKISIDPESNTITIWNNGKGIPVVEHKDEKMYVPALIFGHLLT
SSNYDDEQKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWQNNMGKTSDSKIK
FFDGDDFTCVTFQPDLSKFKMEKLDKDIVALLTKRAYDIAGSCKGVKVMLNGKKLPVTGF
RSYVDLYVKDKLDEVGVALKVVNESVNERWEVCLTMSEKGFQQISFVNSIATTKGGRHID
YVVDQIVAKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKS
FGSKCPLSEKFIRAATNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDA
GGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEI
NNIIKIVGLQYKKSYEDPESLRSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKH
TFLEEFITPIVKVNKNKQEHAFYSIPEFDEWKKQTVNFKTWHIKYYKGLGTSTSKEAKEY
FADMEKHRIMFRYAGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYG
TQAKHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCMKRNDKREVKVAQL
AGSVAEMSAYHHGEQSLLMTIVNLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIF
TMLSPLAKMLFPAVDSSLLKFLFDDNQKVEPEWYIPILPLVLVNGAEGIGTGWACKIPNY
DHREIVNNLYRMLNMQDPLPMLPSYKNFKGVIHELGQNQYMVSGEISVLDKNTIEITELP
VRTWTQAYKESVLEPMLQGTEKTPALINDYKEYHTDQTVKFVVRMSEEKLAQAEAAGLHK
VFKLQSSLTCNSMVLFDHMGCLKRYDSVQDILKEFFELRLHYYKLRKDWLVGSLGAEASK
LSNQAQFVLEKIEGKITIENKSKRELIRMLVQKGFESDPVAAWTKAQEKALEEDDHDGNN
SDSSVDSGSSSGPNFNYILNMPLWCLSKEKVDELLRQRDIKKGELNELQRKSPEDLWKED
LAVFIEELDKIEAQEQADICAGRGTKLVKGKVGKPKVKKLHLEETLPSLYGRRVVPTITQ
AMKTDASKKMTKKKKGDADLVMKLEFDDEMGVLGSDGGTGENSLNSSSNTPAPTPAKPKA
PRVKREKKEPGTPRARKTPTPKGSSGKKVKKRNPWSEDESKSESDLEDSEPVVIPRDTKS
QRASAVKPKYTFDFSEEEDGGEEEEDDEDAASSPVRPCKDDFTASSETKDRYNDHSANDE
DDEDIFPPPKQATTTVSPAKKKEPESIFSSSKSAFSSEKSNDSDDLKLDSDEEDKAFSSY
SSSSAFDKPVPAKKGQEAARSQQDAQYSAKKLSDAALKPRKAPAPKTPPKQKLDTSVWDS
DSDTGSKKPSPALKGKSGGRKRKQSGSEEDDFSPKKTPGKAPKTPASRKPSKKVAVTPPP
MSDDDDVDSNRFSQSSVASRERPGRGRAKKEVKYFAESGSDDDQYDMFE
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagcgggggtctgacttgggtgaccctctttgataagaag
aatgctgccaaaaagagggaggaggaggcagccgcggcggcggcagctgcgaatggcagg
ggtgatgggggcaaggcggagggaggaggaggaggagccaagaagaagggaggagataag
atgtcagtggagagggtgtaccagaagaagacccagctggagcacatcctactgaggcca
gacacctacatcggctctgtggaacctgtcacccagcaaatgtgggttttcgatgaagac
cttgggatgaatctacgagaaatcacttatgtccctggattatacaaaatctttgatgaa
attcttgtcaacgcagctgacaacaaacagcgagataagagcatgtcaaccataaagatc
tccattgatcctgagtccaacaccattaccatctggaacaatggtaaaggcatccccgtg
gtggaacacaaagatgagaagatgtacgttcccgctctcatcttcggacacctcctcacc
tccagtaactacgacgacgagcagaagaaagtcacaggtggaaggaacgggtacggtgct
aaactctgcaacatcttcagcacaaagttcacagtggaaaccgcctgcaaggagtacaaa
cacagcttcaaacagacttggcagaacaacatggggaagacgagcgactccaagatcaag
ttctttgacggggacgacttcacgtgcgtgaccttccagccggacctgtccaagttcaag
atggagaagctggacaaggacatcgtggctctgctcaccaagagggcttacgacatcgct
gggtcctgcaagggcgtcaaagtcatgctcaacgggaagaaactccctgtgacagggttc
cgcagctatgtggacctgtacgtgaaggacaagctagacgaggtgggcgtggccttgaag
gtggtcaacgagtcggtcaacgagcgctgggaggtctgtctcaccatgagtgagaaggga
ttccaacagatcagcttcgtcaacagtatcgccaccaccaagggtggcagacacattgat
tacgtggtggaccagatcgtagccaagctgatagaggtggtgaagaagaagaacaaagct
ggtgtctcagtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaatgcgttg
atcgagaacccgacctttgactcccagaccaaggagaacatgaccctccagaccaagagc
tttggttctaagtgtcctctgtcagagaagttcatcagagcagcgaccaactgtggcatc
gtggagagtatcctgaactgggtgaagttcaaggcccagacacaactcaacaagaagtgt
tcttcagtgaaatacagcaagattaaaggcatccccaagcttgacgacgccaacgatgct
ggtggtaaacactcgtcagaatgcactctgatcctgactgagggagactcggccaagtcc
ttggccgtctctggccttggtgtcattgggcgagatcgctatggtgtcttcccactacga
ggaaaaattctgaacgtacgagaggccacacacaaacagatcatggagaacgcagagatc
aacaacatcatcaagatcgtgggtctgcagtacaagaagagctacgaggacccagagtct
ctgagatccctacgctacggcaagatcatgatcatgaccgatcaggatcaggatggctcc
catatcaagggtttgctcatcaatttcttccatcacaactggccatccctgctcaaacac
accttcttggaggagttcatcacgcccatcgtcaaagtgaacaagaataaacaggagcat
gctttctacagcattccagagtttgacgaatggaagaaacagacggtcaactttaaaacc
tggcatataaagtactacaaaggtttgggtaccagcacaagcaaggaggccaaggagtac
tttgccgacatggagaaacaccggatcatgtttagatacgccgggacagaggacgacgct
gccatcacactggcgttcagtaagaagaagactgacgacaggaaggagtggctcaccaac
ttcatggaggacaggagacagaggaggatgcacggcctgccagagcaatacctgtacggc
acgcaggcgaaacacctgtcctacaacgacttcatcaacaaagaactcatcctcttctcc
aactctgacaacgagagatccatcccatccttagtggacggtctgaagccaggtcagaga
aaggtactcttcacctgtatgaagaggaatgataagagggaggtgaaggtggctcagctg
gctggttcagtggcagagatgtctgcctaccatcatggagagcaatccctgttgatgaca
attgtgaacttggcccagaactttgtgggcagcaacaacgtgaacatcctgcagccgctg
ggtcagtttggtacccgcatcaacgggggcaaggatgctgccagcccccgttacatcttc
accatgctcagtcccctggccaagatgttgttcccagcggtggactccagtctgctgaag
ttcctgttcgatgacaaccagaaggtggagccagagtggtacatccccatcctccctttg
gtgctggtgaacggggccgagggcatcgggacgggctgggcctgcaagatccccaactac
gaccacagagagatagtcaacaacctgtaccgcatgctcaacatgcaggaccctctgccc
atgttgcccagctataagaactttaaaggagtgatccatgagttgggtcagaaccagtac
atggtcagtggcgagatctctgtcctggacaagaacaccattgagatcactgagctgccc
gttcgcacctggacacaggcctacaaggagtcggtactagagcccatgctccaggggaca
gagaagactcccgctctgattaatgactataaggagtaccacacggaccaaaccgtcaag
tttgtagtccgtatgtcagaggagaagctggcccaggcagaggctgctggactacacaaa
gtcttcaagctacagtccagcctcacctgcaactccatggtgttgtttgaccacatgggc
tgtctgaagaggtatgactcggtccaggacattctcaaggagttctttgagctgcggttg
cactactacaagctgaggaaggattggcttgtggggagcctgggggcggaggcttccaaa
ctgtccaatcaggcacaatttgtgctggagaagatcgaaggaaagatcacaatcgagaac
aagtctaagagggaactgatcaggatgctggtgcagaaaggctttgagtcggacccggtg
gcggcatggaccaaggcacaggaaaaggctctggaggaggacgatcatgatggtaacaac
agtgacagctctgtggactctgggtcgtcgtcgggaccaaacttcaactacatcctcaac
atgcctctgtggtgcctgtccaaggagaaggtggacgagctgctccgacagagagacatc
aagaaaggagagttgaatgagctgcagaggaagtctcctgaggacctgtggaaggaggac
ctggctgtcttcattgaggaactggataaaatcgaggcccaggagcaggcagacatatgt
gcaggtagaggcaccaagctggtgaagggcaaggtgggcaagcccaaggtgaagaaacta
cacctggaggaaacgttaccctcgctgtacggccgcagggtcgtacccaccatcacacag
gccatgaagactgacgcctccaagaagatgaccaagaagaagaagggtgatgcagacctg
gtgatgaagttggagtttgatgatgagatgggagtattgggatcagatggaggaacaggg
gagaactccctcaactcctcctctaatacaccagccccaaccccagctaagcccaaggcc
ccccgggtcaaacgggagaagaaggagccaggtactccaagagccaggaaaacccccaca
cccaaaggatcatctggtaagaaggtgaagaagcgtaatccctggtcggaggacgagtcc
aaatcagagagcgatctggaggacagtgaacctgtagtcattccccgagacaccaagtca
caacgggcctcagcggtcaagcccaagtacacctttgatttcagtgaggaagaggatgga
ggagaggaagaggaggatgatgaagatgctgcgtcctcgcccgtccggccctgcaaagac
gacttcactgcctcctccgagactaaagaccgatacaacgaccacagcgccaatgacgag
gatgatgaagatatcttccccccgcccaaacaggcaaccaccaccgtctcaccagcaaag
aagaaggaaccagagagtatattctcttcctccaaatcagcattctcctctgaaaagagc
aatgacagtgacgatctgaagttggacagtgacgaggaagacaaagccttctcctcatac
tccagcagctctgccttcgacaaacctgttccagctaagaaaggacaagaagcagcccgg
tctcaacaagacgcacaatactcagctaagaagctgtcggatgcagctctcaaacccagg
aaagcaccagcgcccaaaacgccaccaaaacagaagcttgacacgtctgtctgggactct
gactccgataccggctccaagaagccttcaccagcgctcaaaggtaaaagtggagggagg
aagaggaagcagtctggatctgaagaggatgatttcagtcccaagaagacacctgggaaa
gcacccaaaacccctgccagcaggaagccatcaaagaaagtagccgtgaccccgcccccc
atgtcagatgatgatgatgtggactccaaccgtttcagccaatccagcgtggcgtcccga
gaacgaccgggcagaggcagggccaagaaggaagtgaagtactttgctgagtcagggtca
gacgatgatcagtacgacatgtttgagtag
DBGET
integrated database retrieval system
