Oncorhynchus nerka (sockeye salmon): 115128603
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Entry
115128603 CDS
T07952
Symbol
sytl1
Name
(RefSeq) synaptotagmin-like protein 1
KO
K17598
synaptotagmin-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115128603 (sytl1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115128603 (sytl1)
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115128603 (sytl1)
Membrane trafficking [BR:
one04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
115128603 (sytl1)
Small GTPases and associated proteins
Rab associated proteins
115128603 (sytl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
Motif
Other DBs
NCBI-GeneID:
115128603
NCBI-ProteinID:
XP_029514432
EnsemblRapid:
ENSONEG00000002306
LinkDB
All DBs
Position
LG4:complement(56027094..56035054)
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AA seq
529 aa
AA seq
DB search
MEGEGELLDLSHLSEAEQSSILEVLLRDSELRSRDDGRLRTLQQKEADPVRLRSLSGAWF
NEERSKRHRDTKNGVDIVQASIRRRKPRTDLPLSGVFNGQTEDAPPTNNKDPTCQINDKK
DEDDKRSYRSQNRLTPTPRTRSPNTQSLQDSNSISSSDYYSRRNVHREETGEGTLQDSED
TNSVSSGVTDADPTPLRPGSSVSSLQSNYTLSGSMMSLFSSGEFGAVEVKGRVLFSLDYD
TQREELQIRVCRCEDLAAARKNHSDPYVKAYLLPDKSSHSKKKTSVKKKTLSPVFDQTLK
YKISVSEVRGRTLNLSVWHAAPLGRNLFLGEVELELAHWDWKHTCSDWYQLQPRVQCSPE
SISSRGNILLSIKFIPAGSEGGGLPLTGELHIWLREAQGLLSTKGGVVDSFIKSYVLPDT
SRSSGQKTRLVKRSVSPTYNHTMVYDGFQPADLREACAELTVWHREGLKTHLLGGVRLSR
GTGLSYGVAVCWMDSTEEEASVWNSMILNPNHWMDTTLPIRTNLADRPE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaaggggagttgttggacctgagtcacctgtcagaggcagagcagtcttcc
atcttggaagtgttgctaagggactctgagctgcgttcccgtgatgatggtcgtttaagg
accctgcagcagaaagaggcagacccagtgcgtttgaggtcactgtcgggggcatggttt
aatgaggagagaagcaaacgccaccgagacacgaagaacggcgttgacatcgtacaggcc
tctatacgacgcaggaagccaagaacagatttgcctctgagtggggtgtttaacgggcag
acagaagatgctcctcccactaacaacaaagacccaacttgtcagataaatgacaagaaa
gacgaggatgacaagagaagttacaggagtcaaaatcgtctcacacctacacccagaacc
aggagcccaaacacacagagtctccaggacagcaacagcatctcatcttcagactattac
agcaggaggaatgtacacagagaggagacaggggagggaacactgcaggactcggaggac
acaaactcggtgtccagtggtgtgacagatgctgatccgacacctctaaggcctgggagc
tcagtcagcagtctacagtctaactacacattgagtggcagtatgatgagtctgttcagt
tcgggggagttcggagcagtggaggtgaaagggcgtgtcctattctcattggactatgac
actcagagggaggagctgcagatcagagtgtgtcgctgtgaagacctggccgccgcacgc
aagaaccactccgacccgtatgtgaaggcatatctcctgcctgataagtcatctcacagt
aagaagaaaacatcagtgaagaaaaagactctcagcccagtctttgaccagacactgaaa
tataaaatcagtgtgtcagaggtgcgtggcaggactctgaacctgtctgtgtggcacgct
gccccactgggcagaaacctgttcctaggagaggtagagctagagctggctcactgggac
tggaaacatacatgctctgactggtaccagctacagccacgggtccagtgtagtccagag
tctatcagtagtcgaggaaacatcctgctctctatcaagttcatcccagcagggtccgag
ggtggaggtctacctctaacaggggagctacacatctggctgcgggaagcgcagggtctt
ctctccaccaaagggggtgtcgttgactccttcatcaagagttacgtgctgccggacacc
agccggtcaagcggtcagaagacacgcctggttaagcggtcggtcagtccgacctacaac
cacaccatggtgtatgacgggttccagcctgctgacctgagagaggcctgtgccgagctg
actgtctggcaccgtgaagggttaaaaacacacctgctgggaggggtccgactcagccgg
gggacaggtctgagctacggagtggcagtgtgttggatggattcaacagaggaagaagca
tctgtttggaattccatgatcctgaaccccaaccactggatggatactacactacctatc
agaactaacctggctgatcgcccagaataa
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