Oncorhynchus nerka (sockeye salmon): 115128608
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Entry
115128608 CDS
T07952
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115128608 (matn1)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
115128608 (matn1)
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
VWA_3
cEGF
EGF_CA
EGF_3
Plasmod_Pvs28
DUF7326
EGF
hEGF
FolB
BRISC_FAM175B_helical
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
115128608
NCBI-ProteinID:
XP_029514442
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All DBs
Position
LG4:complement(56194784..56209282)
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AA seq
496 aa
AA seq
DB search
MIPSPPLFLLLLGLMGAHATPPVSVDLRTAAAMAAGLCNTRPTDLVFIVDSSRSVRPSEF
EQVKVFLAKVIEGLDVGPDATRVGVVNYASRVKNELSLKTHKTKAGLVKAVTKIEPLSTG
TMTGLAIQFALNVAFSEAEGARVKSPDISKVAIIVTDGRPQDNVKDVAARARDAGIELYA
IGVGRVDLNTLKQIASEQLDDHVDYVESYSVIEKLTKKFQEAFCDTVADLCATGDHDCQQ
VCISAPGSFKCACKDGFSLLEDGKSCSACSNAATDVVFLIDGSKSVRPENFELVKKWINQ
IVDKLDVSETKAHVGLVQYSSSVKQEFPLGRYNNKKDLKDAVKKMAYMERGTMTGQALRY
LTDSSFAPAGGARPGVAKVGIVFTDGRSQDYIGDAAKKAKEQGFRMYAVGVGNAVEDELR
EIASQPTGEHYFYTADFKAMTAIAKKLQINICQEEDPCECDSVVKFQKKVEEALQALTKK
LEGVSKRIAALENKIV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgataccctctccgccattgttcctgttgctgctcggcctcatgggagcgcatgccacc
cctcccgtgtccgtggacctccgcaccgctgccgccatggcggcaggtctgtgtaacact
cgccctacagacctggtgttcatcgtggacagcagtaggagcgtgcgtccgtcagagttc
gagcaggtcaaggtgttcctggccaaggtcatcgagggactggatgttggacctgacgcc
acacgggtcggagtggtcaactatgccagccgcgtcaagaatgagctgtctctgaagacc
cataaaaccaaggcaggtctggtaaaggctgtgactaagatcgagcccctgtccactggc
accatgaccggccttgctatccagttcgccctcaacgtagctttcagcgaggctgagggc
gcccgcgtcaagtccccagacatcagcaaggtggccatcattgtgacagacggtcgtccc
caggacaacgtaaaggatgtggcggcgcgtgcccgggatgcaggtatcgagctatacgcc
attggcgtagggcgtgtagacctgaatacgctgaagcagatcgccagcgagcagctggac
gaccacgtggactacgtagagagctactcagtcatcgagaaactcaccaagaagttccag
gaggctttctgtgacacagtggcggacctgtgtgccactggagatcatgactgtcagcag
gtatgcatcagcgcaccagggtcattcaagtgtgcctgcaaggatggcttcagtctactg
gaggatggcaaaagctgcagcgcctgcagtaatgccgccacagacgtggtgttcctgatc
gatggttctaagagtgtgcgtccagagaactttgaactggtcaagaagtggatcaaccag
atcgtagacaaactggacgtctccgagaccaaggctcatgttggactggtccagtactcc
agctctgtcaaacaggagttccctctgggacgttacaacaacaagaaggacctaaaggac
gcagtgaagaagatggcctacatggagagggggaccatgacaggacaggccctgcgctac
ctgaccgacagcagctttgcaccagccggtggggcacggcccggggtggccaaggtcggc
attgtgttcaccgatggacgtagccaggactacatcggagacgccgccaagaaggccaag
gagcaaggttttaggatgtatgctgtgggcgtgggtaatgctgtagaggatgagttgagg
gagatagcatcacagccaacaggagaacactacttctacactgctgacttcaaagccatg
acagccattgctaagaagctgcagatcaacatctgtcaagaggaggacccatgtgaatgt
gactctgtcgttaagttccagaaaaaagtagaagaagccttacaggcacttacgaaaaaa
ctggagggcgtgtcaaagaggatcgctgcactggagaacaagattgtctga
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