KEGG   Oncorhynchus nerka (sockeye salmon): 115128612
Entry
115128612         CDS       T07952                                 
Symbol
sdc3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04514  Cell adhesion molecule (CAM) interaction
one04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    115128612 (sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115128612 (sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:one00535]
    115128612 (sdc3)
Proteoglycans [BR:one00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   115128612 (sdc3)
SSDB
Motif
Pfam: Syndecan SDH8
Other DBs
NCBI-GeneID: 115128612
NCBI-ProteinID: XP_029514445
LinkDB
Position
LG4:complement(56231373..56267085)
AA seq 432 aa
MKLPPCLMTILAALLAHSALGQTWVPSIDLEGPSGDEFYDDEDLFSGSGSGFPEMKVNPT
AVGVSFSTEEPLPLSTTQATGPAPSAPPAAEPNPNPDALPTPLPTEGEGESGIEWERGRE
RERERERERVREMERERDREREREKEREREKERERERERERQREIERERERERERARAAQ
TTISPRGPAAVPMATTSTATPLAESVAPSSGVQDLVTTEEEDEDVYLSPDSTTSMPMETT
TEEEEEEVTTTDTETTPLPKTTAPPTTIGPALTERSSSAPFRPSVLVTTPIKAAPTERST
RPQQPSTTMNNELGVNGPSGDFEIREEDRRQGNEVVGRGLGMETGAEPDLIGNTINTGSS
AAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVT
YQKADKQEEFYA
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgaagctgccgccgtgtctgatgacgatcctcgcggcgctgctcgctcactccgcgctg
ggtcagacctgggttccgtctatagatctagaaggtccttctggagatgagttctatgat
gatgaagacctcttctcaggctctggatctggctttccagagatgaaggtcaaccctaca
gcggtgggtgtgtctttcagcactgaggagccccttcccctttccaccacccaggctact
ggccccgccccctcagccccacctgcagccgagcccaatcccaaccccgacgctctcccc
accccactacccactgagggagagggggagagtgggatagagtgggagagagggagggag
agagagagggagagggaaagagagagagtaagggagatggagcgggagagggatagagag
agggagagagaaaaggagagggagagagaaaaggagagggagagagaaagagagagagag
aggcaacgggaaatagagagggaacgagaaagagaacgtgaaagagcgagagccgcccag
accaccatctcaccccgtggcccggcggctgttcccatggcgaccaccagcacagcgacg
cctctggcggagagtgtagcaccctctagtggcgtgcaggacctggtcaccacagaagaa
gaggacgaggatgtctacctgtccccagactccaccaccagtatgcctatggagaccacc
acggaagaagaagaggaagaagtgaccactacagatacagagaccacacccctcccaaag
acaacagctccacccactacgattggaccagccctaactgagaggtctagctccgccccc
tttaggcccagtgttctggtgaccacgcctattaaagccgcacccacagagaggagcaca
cgcccacagcagccttctacgacaatgaataatgaattaggggttaatggacccagcgga
gactttgagatccgggaggaggaccgtcgccagggcaacgaggttgttggtcgtggcctt
ggcatggagactggggcagaacctgatctgattggcaacacaattaacacaggaagttct
gccgctcaacttcctcagaagaacatcttggagaggaaggaggttctgatagcggtgata
gtggggggcgtggtgggggccctgtttgcagcgttcctggtcatgctgctggtgtacagg
atgaagaagaaagatgaaggcagctacacactggaggaacccaagcaagccaccgtcacc
taccagaaagctgacaaacaggaggagttctacgcataa

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