Oncorhynchus nerka (sockeye salmon): 115128641
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Entry
115128641 CDS
T07952
Symbol
atxn1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115128641 (atxn1)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
115128641
NCBI-ProteinID:
XP_029514542
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Position
LG4:complement(57143000..57203372)
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AA seq
822 aa
AA seq
DB search
MKSNQERSNECLPPKKRDFPASTVDERPLVMAPASESQRGENLAWLASVASGHNSGHDRD
SGGGGLDGSRGGQRISTPIESDGPQYKPLCSTITTHTDFLVPSSICSISSSSSSHQSRVV
TTSLPAMYTSALSQPGGTIQYTQLPPNVQFISSPYTGPYAGYISSQLLSPPPPTSTSQCS
HPDPYPNTTITSQSQISGSSLSVAPQTAPSPHGGTHHLPLHLHSHPHHTLALSGGSQVLV
QYTGPGPEGTLIKREEGRPRELHNGDQRGRYERKESKGTPSSSSSSSSQYHQLHQQQSAQ
HHYEAYTSHDASGQRTSLMIVPNSRGGSDNHSPDKLRPSAASQTEKGSLLLGKPVSCTPS
SSSTFTFPPPLSVESLKAAVSSLSPHTHTVIQTTHSASEASPRSLGQLSTNTNFYQAGPG
GQPIIGYLAGSAGGQRYHTSLPQHLLIPGSQPIIIPVSGAGVTSLEAGHAAHIATTTQSQ
SFPTTLPHTYFTNTTNPNPNPKDEHLFEVPAPYPPLSHPAGVGGTVVQAQLHLPVVPAPT
TPSSAPSSAPSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERI
DGSHTSNFAIVQFSVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSV
GDVCISLTLKNLRNGSLKKTQQTQNQATEITTSCNMGSIHGPLKSSRSARHGEQENGVGQ
RGSRSGYGRVVVGVGGGVQIASENGELRFGAGGEANSKGGQPGDSESSGGAAKPVSRKRR
WSAPEGRKVERSEKEPPLTLPKPSFITQEVKISIEGRSNIGK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggagcgcagcaacgagtgtctgccccccaagaagagagatttccca
gctagcactgtggacgagaggcccctggtgatggcgcctgctagtgagagccagcgcgga
gagaacctggcatggctggccagcgtagccagcgggcacaacagtgggcacgatagagac
agtggcggaggtggcctcgatggcagtagaggtgggcagcgtatcagcactcccattgag
tctgacgggccacagtacaaaccgctatgctccaccatcacaacacacacagacttcctg
gtcccttcctctatctgttccatctcctcctcctcttcatcacatcagtccagagtggtg
accacatccctccctgccatgtacacttctgctttgtcccaaccaggggggacgatccag
tacacccagctgccccccaacgtccagttcatcagttccccttacacaggcccctacgct
ggctacatctcctcccagctcctctctccccctccacccacctccacatcccaatgctcc
caccctgacccataccccaacaccaccatcacctcccagtcccagatctctggttcctct
ctgagcgtggccccccagactgctccctcgccacacggtgggacccaccacctgcccctc
cacctgcactcccacccccaccacaccctggccctcagcgggggctcccaggtgctggtc
cagtacacaggccccggccctgaggggaccctgattaagagagaggagggccggcccagg
gagttgcacaacggagatcagaggggccgctatgaaagaaaggaaagcaaaggaaccccc
tcctcttcttcctcctcttcctctcagtaccaccaactccaccagcagcagagcgcgcag
catcactatgaggcctacacctcccatgatgcatcagggcaacggacctctctaatgata
gtgcccaacagccgcggaggatcagacaaccacagccccgacaaactacggccatccgcc
gcctcgcagacagagaaaggcagcctccttctgggtaaacctgtgtcctgcaccccctcc
tcctcctccacgttcaccttcccccctccgctcagtgtggagagtcttaaggcggccgtc
agctccctgtcccctcacacccacacagtcatccagaccacacacagcgccagcgaggct
tcgccccgctccctgggccaactctccaccaataccaacttctaccaggctggccccggc
gggcagcccatcatcggctacctggctgggagtgcaggagggcagcggtaccacaccagt
ctgccccagcacctgctcatcccagggtctcaacctatcatcatccccgtcagtggggcc
ggagtcaccagcctggaggctggccatgctgcccacatagccactacaacccaatcacag
tccttccccaccacgctaccccacacttacttcaccaacactaccaaccctaaccccaac
cctaaagatgagcatctatttgaggtcccggcgccctacccccctctctcccaccctgcc
ggggttggaggcactgtggtccaggcccagctacacctcccggtggtcccagctcccacg
accccctcctcagccccctcctcggccccgtcgctgcctccctacttcatcaagggctct
atcatccagctggcagacggggagctgaagcgcgtggaggacctgaagacggaggacttc
atccagagcgctgagatcagcagcgagctgaagatagactcgtccaccgtggaacgcatc
gatggcagccacacgtccaacttcgccatcgtacagttctccgtgggcgagcaccgcgct
caggtgagtgtggaggtgctggtggagtatcccttcttcgtattcggccagggctggtca
tcgtgctgcccagaccggaccactcagctgttagaactaccctgcaccaagctctcagtg
ggggacgtctgcatctccctcaccctgaagaacctgaggaacggctccctgaagaagacg
cagcagacccagaaccaggctactgagatcactaccagctgcaatatgggctccatccac
ggccccctcaaatcctccaggtcagccaggcacggggagcaggagaacggggtgggccag
agaggctccaggagtggatatgggagagtggtggttggagtaggtggaggtgttcagatc
gcctcagagaatggggaactgaggttcggcgccgggggagaggccaactcgaaaggaggc
cagcctggagattcagaatctagtggtggtgccgccaagccggtgagccgcaagaggaga
tggtcggcccccgagggccgtaaggtggagaggagcgagaaggagcccccgttgactctg
cccaaaccttcctttatcactcaggaggtaaagatcagcatcgaaggcaggtcaaatata
ggcaagtag
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