Oncorhynchus nerka (sockeye salmon): 115128647
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Entry
115128647 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 10-like
KO
K10497
zinc finger and BTB domain-containing protein 10
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115128647
04121 Ubiquitin system [BR:
one04121
]
115128647
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
115128647
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
115128647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-H2C2_5
zf-C2H2_16
BTB_KLHL33
zf-C2H2_4
BTB_SANBR
Motif
Other DBs
NCBI-GeneID:
115128647
NCBI-ProteinID:
XP_029514561
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Position
LG4:57627982..57649543
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AA seq
762 aa
AA seq
DB search
MSGERNRRSLAFRGGGLAVTGSSGVGGSNSNSWEAQACQDPNLNGNRPDQEEDRDLGAKG
PSQERVEGGGSVSDSTEPEAEEEEDPEGGNWADGNGDDRVGWVAVTVRKDESRKGSNWTA
GNGLNREDRGEAGSGGDGEQETGGARKSWVEMRPQTLLQKHSPFQASWRQEFPWLKFCQE
TGLMSCSWCHNIATKNNDELVKGSRNYKRALLLRHHLSSEHGRNDPTKQELERPGCEDPP
QGTDMETEDYYRNNKPNQDSYCYQLLQELNKQRKGGILCDVNIVVSGEVFRAHKNILVAG
SRYFKTLYCLTKSENTSSSSSSCNQTTTVTDTHLDVAAVAGSVILDFLYSGNLLLTSQNA
IEVMSVASYLQMTEVVGSCRGFIKEALNISIKQEAPDSVVVDYNKRRTVAKDGAGQVGSD
GSTNKKPGSNFWATSILSKLSIKASGHVQDGEQAGGGSVKEEPSDVELSAGEGCTLGSSS
WGCENSSESAENEPPSVPGPGPVFVWNEPAPGAAAGRVVAVKREGQRVPGSGRRKKQITR
RFVYNIPPEPEEGFDEGMFIQPSASYPREDFSFLSENAELANQIQYSLLQDSSQQGESWE
NGESSDTALNKLKCPHCNYIAKHRRTLKRHLIIHSGVRSFSCDICGKLFTRREHVKRHSL
VHKKDKKYKCMVCKKIFMLAASVGIRHGSRRYGVCAECAECADSHQATQEGLESLEGFVR
EDDDFEEGEEPDEDMAEEGEEPNDNDQSNWEEGDTGAALENE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggagagaaaccgcaggtcgctggcgttcagaggaggtggattagccgtaacc
ggttccagtggtgtcggggggagcaacagtaacagctgggaggcccaggcctgtcaagac
ccaaatttgaacgggaacagaccagatcaagaagaggatagggatctgggggcaaaagga
ccatcgcaagagagagtggagggtgggggatctgtcagcgatagcacagaaccagaggcg
gaggaggaagaggacccggaagggggcaactgggcagacgggaacggagatgatcgtgtc
ggttgggtggcagtaactgtcagaaaagacgagtccaggaaagggagtaactggacagcg
ggtaacggcctgaacagggaggacagaggcgaagcggggagcgggggagacggggagcag
gaaacgggtggtgccaggaagtcttgggtagaaatgagaccgcagacgttactccagaaa
cattcgccattccaagcatcatggcgacaggagttcccatggctcaaattttgccaggag
acgggacttatgtcttgctcctggtgtcacaacattgccactaaaaacaacgacgagctg
gtgaaaggcagtcgaaattacaagcgggccttgcttttgagacatcacctgtcttctgag
cacggaaggaatgatccgaccaagcaggagctggagcggcctggctgtgaggaccccccc
caggggacagacatggagacagaagactactacaggaacaacaaacctaaccaggactcc
tactgctaccagctgctgcaggagctaaacaaacaacgcaagggaggaatcctctgtgac
gtcaacatcgtggtgagtggagaggtgttccgggcgcacaagaacatcctcgtggccggg
agccgctactttaagaccctctactgcctgaccaagagcgagaacacttcttcatcatcc
tcgtcatgtaaccagacgaccacagtcaccgacacccacctcgacgtggcggcagtggca
ggttcggtcatcctggacttcctgtatagtggtaacctcctgctgaccagtcagaacgcc
atcgaggtaatgtccgtggcctcctacctccagatgacagaggtggtgggatcgtgtcgg
gggttcatcaaggaagccctcaacatcagcatcaagcaggaggcccccgactcagtggtg
gtggattacaacaagaggagaacggtggccaaagacggagctggacaggtgggctcagac
ggcagcacaaacaagaagcctgggagtaacttctgggccaccagcatcctgtccaagctg
tcaatcaaagccagtggtcatgtccaggatggggagcaagcagggggaggcagcgtaaag
gaggagcccagtgacgtggagctgtctgcaggggagggctgcaccctgggaagctccagc
tggggctgtgagaactcatccgagtctgctgagaacgagcctccgagcgttccgggaccg
gggccggtgttcgtctggaacgagccagctcccggggctgcggcgggcagggtggtggcg
gtgaagagggaaggtcagagggtgccggggagcggacggaggaagaaacagatcacgcgg
cggttcgtctacaacatcccaccagagccagaggaagggtttgatgaggggatgttcatc
cagccctcagcctcctatcccagggaggacttctccttcctctctgagaacgccgaactg
gccaaccagattcagtacagcctcctacaagactcctcccagcaaggagagtcctgggag
aatggcgagtcgtccgacacggccctgaataagctcaagtgtccccattgtaactacatc
gccaagcaccggagaacactaaagaggcacctcatcattcactccggcgtccgctccttc
agctgtgatatctgtggcaagctgttcacccgcagagagcacgtcaagagacattccctg
gtgcacaaaaaggacaagaagtacaagtgcatggtatgtaaaaagatcttcatgctggcg
gccagcgtggggatccggcatggctcgcggcgctacggcgtttgtgcggaatgtgcggaa
tgtgcagattcccaccaggccacacaggagggcctggagtccctggaggggttcgtccgt
gaagatgatgacttcgaggagggggaggagcctgacgaggacatggctgaggagggggag
gagcctaacgacaacgaccaatccaactgggaggagggtgacactggtgctgcccttgag
aacgagtag
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integrated database retrieval system
