KEGG   Oncorhynchus nerka (sockeye salmon): 115128675
Entry
115128675         CDS       T07952                                 
Name
(RefSeq) TBC1 domain family member 5-like
  KO
K18469  TBC1 domain family member 5
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115128675
Membrane trafficking [BR:one04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    115128675
SSDB
Motif
Pfam: RabGAP-TBC RabGap-TBC_2 DUF7615 SNaCT9
Other DBs
NCBI-GeneID: 115128675
NCBI-ProteinID: XP_029514608
LinkDB
Position
LG4:complement(59372236..59397901)
AA seq 865 aa
MQHPNFETHHPLQPDGEQEPGFDPLHNFNKNHSRGGSLDSSRLSYSESESTFLSYRKEWD
DLFLNSNYLARIRQAGIGGRLRSSRFRSVCWKLYLEVLPEDKSQWLNKTKELRAQYEKIK
ETHITNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELRGMIKQDVMRTFPEMRYFQDE
AVRTKLTDILFCYARENELLLYKQGMHELLAPIVFVLHCDHQAFQHASETAYPSEEMLSL
LNPMFHEHDAYAMFSQLMETAEPWFSSLEREVRRGKDEMLTSMPFARPQDSGPSVAIVTK
VNRIQDQLVKKHDVELHMHVNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSI
TLDLVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHTLLHKALFLRDPKNNPRP
ANYQFQQNLDYYKTRGADLVNNTRASGKMAPLNINKVSSSLLSFGRKLIAPALSGGGSSG
ISPINSEVLSAPSPVTVGPHPQAEPLLSGHAPLQTQTPPHSQHHRLLKSESMPVHLSKVS
GGVSQVPVPAHIFSDTKGQISRTASSSPSIESLSGGRGHTTASPPLSVTRENDTSTSSPP
LSATRKDSFFNITRSRSHSKTMMGKKEAEEELEAQVSFLQGQINDLEAMSKYCAKMMNTH
IGKIQEVILQEHLEKEDEVLVSLAGLKQIKDILKGALRFNQSLLEAEENEEITIADDHYD
IASNAAAAIVEQLANCHHDKHPFQATPQRGDGDGEQKDREEEEHEHTESEQQASPPESSL
SVGSEGKNWDDYILVSQDGELQPTERGAERTPPTRLLRGSLRVEPEGVGVFQDPLMGAAS
GSSSPDEGSTHSKDYDFTIVNPQDL
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgcagcaccctaacttcgagacccaccaccctctccagcctgatggagagcaggagcct
ggctttgaccccctccacaacttcaacaagaaccacagccgtggaggatctctggatagt
agcaggttgtcttactcagagtctgagtccaccttcctttcctacaggaaagaatgggat
gacttgttcctgaacagtaattatctggccaggattcggcaggcaggcatcggcggccga
ttgcggagcagccgattccgcagtgtgtgctggaagttgtacctggaggtccttcctgag
gataagagccaatggctcaacaagaccaaggagctgcgagcccagtatgagaagatcaaa
gagactcacatcaccaacccccgtaaagctgcaggccagcaggacctggtggtcaacaat
ccactctcgcaggacgaggggagcctgtggaacaagttcttccaggacaaagagctgaga
gggatgatcaaacaggacgtgatgagaacctttcctgagatgcgttacttccaagacgag
gctgtcaggaccaagctgacagacatcttgttctgttacgcccgagagaatgaactgcta
ctgtataaacagggaatgcatgagttgttagctcctatcgtgtttgtcctgcactgtgac
catcaggcctttcagcacgccagcgagaccgcgtaccccagtgaggagatgctgtctcta
ctgaatcctatgttccatgagcatgatgcctatgccatgttctcccagctgatggagaca
gcagaaccctggttctccagcttggagagagaagtcagaagggggaaggacgagatgctg
accagcatgccgttcgcccgtccgcaggactctgggccgtctgttgccatagtgaccaaa
gtgaaccgcatccaggaccagctggtgaagaaacacgacgtggagctgcacatgcacgtc
aaccgcctggagatcgccccgcagatatacggcattcgctgggtgcgtctgctgtttggc
cgtgagttccccctgcaggacctgttggtggtgtgggatgccctgttcgctgacagcatc
actctagacctggtggactatgtcttcgtagccatgctgctctacatcagagatgccttg
atagcgagtaacttccagacctgtcttggccttctaatgcactacccacctataggagac
atccacaccctactacacaaggctctgttcctcagagatcccaagaacaatcctcggcca
gccaactaccagtttcaacagaatctggattattacaagaccagaggagcggacctggtc
aacaacacccgtgccagtggcaagatggctcctctcaacatcaacaaggtctccagcagt
ctgctcagcttcggtaggaagctcatcgcccctgctctgtcagggggtggctccagcggc
atctctccaattaatagcgaggtcctgtctgccccctcccccgtcactgtgggtcctcac
ccccaggccgagcccttgttgtctggccatgcacccctgcagacgcagacaccaccccat
tcccagcaccaccgcctactcaagtctgagagtatgcctgtccacctgagcaaagtttca
ggaggagtctctcaggttcctgtcccagcccacattttctctgacacaaaaggccaaatc
tccaggacagctagctcctcccccagcatagagagcctctctggagggcggggtcacact
actgcatccccacccctttctgtcaccagggaaaatgacaccagcacgtcgtctccgccc
ctctcggccaccaggaaggattccttcttcaacatcactcgctcccgctcccacagcaag
accatgatgggcaagaaagaggctgaggaggagttggaggcccaggtgtccttcctgcag
ggtcagatcaacgacctggaggccatgagcaagtactgtgccaaaatgatgaacacacat
attggtaagatccaggaggtgatcctacaggagcacctggagaaagaagacgaggtgttg
gtgtcactggctggactcaaacagatcaaggacatcctgaagggagcgctgcgtttcaac
cagagcctgctggaggctgaggagaacgaggagatcaccatcgctgacgaccactatgac
atcgcctccaatgccgctgcagccatcgtagaacagctcgccaactgtcaccatgacaaa
caccccttccaggccacaccgcagcgtggcgacggtgatggagaacagaaggaccgagag
gaggaagagcatgagcacacggagtcagagcaacaggcgtctcccccagagtcatctctg
tctgtgggttcggaggggaagaactgggacgactacatcctggtctcgcaggacggagag
ctgcagcccaccgagagaggggccgagaggacccctccaaccagactgctccgtggctcg
ctcagggtggagccggagggcgtgggggtgttccaggaccccctaatgggtgcagcgtct
ggctcctccagcccagacgagggcagcactcacagcaaagactatgacttcaccatcgtc
aacccccaggacctgtga

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