Oncorhynchus nerka (sockeye salmon): 115128675
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Entry
115128675 CDS
T07952
Name
(RefSeq) TBC1 domain family member 5-like
KO
K18469
TBC1 domain family member 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115128675
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115128675
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF7615
SNaCT9
Motif
Other DBs
NCBI-GeneID:
115128675
NCBI-ProteinID:
XP_029514608
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Position
LG4:complement(59372236..59397901)
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AA seq
865 aa
AA seq
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MQHPNFETHHPLQPDGEQEPGFDPLHNFNKNHSRGGSLDSSRLSYSESESTFLSYRKEWD
DLFLNSNYLARIRQAGIGGRLRSSRFRSVCWKLYLEVLPEDKSQWLNKTKELRAQYEKIK
ETHITNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELRGMIKQDVMRTFPEMRYFQDE
AVRTKLTDILFCYARENELLLYKQGMHELLAPIVFVLHCDHQAFQHASETAYPSEEMLSL
LNPMFHEHDAYAMFSQLMETAEPWFSSLEREVRRGKDEMLTSMPFARPQDSGPSVAIVTK
VNRIQDQLVKKHDVELHMHVNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSI
TLDLVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHTLLHKALFLRDPKNNPRP
ANYQFQQNLDYYKTRGADLVNNTRASGKMAPLNINKVSSSLLSFGRKLIAPALSGGGSSG
ISPINSEVLSAPSPVTVGPHPQAEPLLSGHAPLQTQTPPHSQHHRLLKSESMPVHLSKVS
GGVSQVPVPAHIFSDTKGQISRTASSSPSIESLSGGRGHTTASPPLSVTRENDTSTSSPP
LSATRKDSFFNITRSRSHSKTMMGKKEAEEELEAQVSFLQGQINDLEAMSKYCAKMMNTH
IGKIQEVILQEHLEKEDEVLVSLAGLKQIKDILKGALRFNQSLLEAEENEEITIADDHYD
IASNAAAAIVEQLANCHHDKHPFQATPQRGDGDGEQKDREEEEHEHTESEQQASPPESSL
SVGSEGKNWDDYILVSQDGELQPTERGAERTPPTRLLRGSLRVEPEGVGVFQDPLMGAAS
GSSSPDEGSTHSKDYDFTIVNPQDL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccctaacttcgagacccaccaccctctccagcctgatggagagcaggagcct
ggctttgaccccctccacaacttcaacaagaaccacagccgtggaggatctctggatagt
agcaggttgtcttactcagagtctgagtccaccttcctttcctacaggaaagaatgggat
gacttgttcctgaacagtaattatctggccaggattcggcaggcaggcatcggcggccga
ttgcggagcagccgattccgcagtgtgtgctggaagttgtacctggaggtccttcctgag
gataagagccaatggctcaacaagaccaaggagctgcgagcccagtatgagaagatcaaa
gagactcacatcaccaacccccgtaaagctgcaggccagcaggacctggtggtcaacaat
ccactctcgcaggacgaggggagcctgtggaacaagttcttccaggacaaagagctgaga
gggatgatcaaacaggacgtgatgagaacctttcctgagatgcgttacttccaagacgag
gctgtcaggaccaagctgacagacatcttgttctgttacgcccgagagaatgaactgcta
ctgtataaacagggaatgcatgagttgttagctcctatcgtgtttgtcctgcactgtgac
catcaggcctttcagcacgccagcgagaccgcgtaccccagtgaggagatgctgtctcta
ctgaatcctatgttccatgagcatgatgcctatgccatgttctcccagctgatggagaca
gcagaaccctggttctccagcttggagagagaagtcagaagggggaaggacgagatgctg
accagcatgccgttcgcccgtccgcaggactctgggccgtctgttgccatagtgaccaaa
gtgaaccgcatccaggaccagctggtgaagaaacacgacgtggagctgcacatgcacgtc
aaccgcctggagatcgccccgcagatatacggcattcgctgggtgcgtctgctgtttggc
cgtgagttccccctgcaggacctgttggtggtgtgggatgccctgttcgctgacagcatc
actctagacctggtggactatgtcttcgtagccatgctgctctacatcagagatgccttg
atagcgagtaacttccagacctgtcttggccttctaatgcactacccacctataggagac
atccacaccctactacacaaggctctgttcctcagagatcccaagaacaatcctcggcca
gccaactaccagtttcaacagaatctggattattacaagaccagaggagcggacctggtc
aacaacacccgtgccagtggcaagatggctcctctcaacatcaacaaggtctccagcagt
ctgctcagcttcggtaggaagctcatcgcccctgctctgtcagggggtggctccagcggc
atctctccaattaatagcgaggtcctgtctgccccctcccccgtcactgtgggtcctcac
ccccaggccgagcccttgttgtctggccatgcacccctgcagacgcagacaccaccccat
tcccagcaccaccgcctactcaagtctgagagtatgcctgtccacctgagcaaagtttca
ggaggagtctctcaggttcctgtcccagcccacattttctctgacacaaaaggccaaatc
tccaggacagctagctcctcccccagcatagagagcctctctggagggcggggtcacact
actgcatccccacccctttctgtcaccagggaaaatgacaccagcacgtcgtctccgccc
ctctcggccaccaggaaggattccttcttcaacatcactcgctcccgctcccacagcaag
accatgatgggcaagaaagaggctgaggaggagttggaggcccaggtgtccttcctgcag
ggtcagatcaacgacctggaggccatgagcaagtactgtgccaaaatgatgaacacacat
attggtaagatccaggaggtgatcctacaggagcacctggagaaagaagacgaggtgttg
gtgtcactggctggactcaaacagatcaaggacatcctgaagggagcgctgcgtttcaac
cagagcctgctggaggctgaggagaacgaggagatcaccatcgctgacgaccactatgac
atcgcctccaatgccgctgcagccatcgtagaacagctcgccaactgtcaccatgacaaa
caccccttccaggccacaccgcagcgtggcgacggtgatggagaacagaaggaccgagag
gaggaagagcatgagcacacggagtcagagcaacaggcgtctcccccagagtcatctctg
tctgtgggttcggaggggaagaactgggacgactacatcctggtctcgcaggacggagag
ctgcagcccaccgagagaggggccgagaggacccctccaaccagactgctccgtggctcg
ctcagggtggagccggagggcgtgggggtgttccaggaccccctaatgggtgcagcgtct
ggctcctccagcccagacgagggcagcactcacagcaaagactatgacttcaccatcgtc
aacccccaggacctgtga
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