Oncorhynchus nerka (sockeye salmon): 115128678
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Entry
115128678 CDS
T07952
Name
(RefSeq) ubiquilin-4-like
KO
K04523
ubiquilin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115128678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115128678
03051 Proteasome [BR:
one03051
]
115128678
Membrane trafficking [BR:
one04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115128678
Proteasome [BR:
one03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115128678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
UBA_7
YukD
CUE
UBA_HOIP
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
115128678
NCBI-ProteinID:
XP_029514613
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Position
LG4:complement(59581424..59593931)
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AA seq
598 aa
AA seq
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MADNGGADPVNNNNDTTVGLEGTIIKVTVKTPKDKEEIAISEDASVTQFKEEISRRFKAK
QDQLVLIFAGKILKDGDSLNQHGIKDGLTVHLVIKTAHKAGDGASSSSSVTTQVGSSSGN
SSGPSSAAHPSTVGSTGGPASAPPQTPNILTGFGGLSSLSSMGMGSANFMELQQQMQSQL
MSNPEMLSQIMENPLVQNMMSNPDLMRQMIVANPQMQQLMERNPEISHMLNNPELMRQTM
ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARDQFGNNPFSAL
GGNSDGGVQPSRTENREPLPNPWGSTNPSEGGGGTGTTGSSATGSTTPNVSNPLGVNSAS
LGNGMFSSPGMQSLMQQISENPQLMQNMLSAPYMRSIMQSLAQNPDMASQVLMNNPLLAG
NPQLQEQFRSQLPVFLQQMQNPEALSVMTNPRAMQALLQIQQGLQTLQTEAPGLMPSLAP
GGLPGGLPGGLPGGLVGGLPGGIPTTPLSTGGGVAPENPASSPSAGENPAQQLMMQQMLQ
MFAGGNSSSQTPEVQFQQQLEQLGAMGFINREANLQALIATGGDVNAAIERLLGSQPS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacggcggcgcagatcctgttaataacaacaatgatacaactgttggtttg
gagggaactattatcaaggtcacagtcaaaaccccgaaagacaaggaggaaatcgccatc
tcggaagatgcctctgtcactcagtttaaagaggagatctcacggaggttcaaagccaag
caggatcagttggttctgatctttgcagggaagatactgaaagacggggactctctcaac
cagcatggcatcaaggatggcctgacagtccatctggtcataaagacagcacacaaggca
ggagatggcgctagttcctcttcctctgtcaccacccaggtgggcagcagtagtggcaac
tcctctggccccagttctgcagcccacccttctactgtagggtccactggaggccctgcc
tcggcacccccacagacccccaacatactgaccgggttcggtggcttgtccagcctgagc
agcatgggcatgggctccgctaacttcatggagctgcagcagcagatgcagagccagctg
atgtccaacccggagatgctgtcccagatcatggagaaccccctggtgcagaacatgatg
tccaacccagacctgatgaggcagatgatcgtggccaacccccagatgcagcagctgatg
gagcgcaaccccgagatctcccacatgctcaacaacccagagcttatgagacagaccatg
gagctggccaggaaccctgccatgatgcaggaaatgatgcgtaaccaggaccgggcgctt
agcaacctggagagcatccccggaggctacaatgccctgcgcaggatgtacacagacatc
caggagcccatgttcagcgccgcacgagaccagtttggaaacaaccctttctcagccctg
gggggcaactctgacgggggggtgcagccatcgaggacagagaaccgggagcccctgccc
aacccctggggttcaactaacccctctgagggtggagggggcacgggcaccacaggctcc
tctgccactggcagcaccacccccaatgtgtccaaccctctgggcgtcaactctgccagt
ctgggtaacggcatgttcagcagtccgggcatgcagagtctgatgcagcagatctcggag
aacccccagctgatgcagaacatgctgtctgctccctacatgcgcagtatcatgcagtct
ctggcccagaacccagacatggcctctcaggtgttgatgaataaccctctgttggctgga
aacccccagctgcaagaacagttcaggagccagctgcccgtcttcctgcagcagatgcag
aacccagaggctctttctgtgatgaccaacccccgggccatgcaggctctcctccagata
caacagggcctacagacactgcagacagaggcaccgggactcatgccaagtttggcacca
ggaggtctccctggaggtctccctggaggtctaccagggggactagtgggcggattacca
ggtggaatacccacaactcccctgtccacgggagggggtgtggctccagagaaccctgcc
tcttcgccgagtgctggggaaaacccagcccagcaactgatgatgcagcagatgctccaa
atgttcgcaggagggaattcctcgagccagaccccagaggtgcagttccagcagcagctg
gagcagctgggcgctatgggcttcatcaaccgagaggccaacctgcaggccctgatcgct
accggaggagatgtcaacgctgccattgagagactgctgggctcacagccctcataa
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