Oncorhynchus nerka (sockeye salmon): 115128700
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Entry
115128700 CDS
T07952
Name
(RefSeq) protein argonaute-2-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115128700
03036 Chromosome and associated proteins [BR:
one03036
]
115128700
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115128700
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115128700
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115128700
microRNA pathway
RISC loading complex
115128700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoMid
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
115128700
NCBI-ProteinID:
XP_029514648
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Position
LG4:complement(60198093..60221839)
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AA seq
895 aa
AA seq
DB search
MYSSGAAGAAEMLEPPHSSGSIGSDPSDPDPPSPPVPEYVFKPPSRPDFGTMGRTIKLQA
NFFEMEIPKLEVYHYDIDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVYDGRKNLYT
ATPLPIGREKNTCVPKQVELEVTIPGEGKDRNFKVAIKWVSCVSLQTLQEALSGRLPNIP
FETIQALDVVMRHLPSMRYTPVGRSFFTPSEGCSNPLGGGREVWFGFHQSVRPSLWKMML
NIDVSATAFYKAQPVIEFMCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGNHSLPGLKVEI
THCGQMKRKYRVCNVTRRPASHQTFPLQQENGQTIECTVAQYFKDKYKLILRYPHLPCLQ
VGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSANFN
NDPYVREFGVMVRDEMTEVNGRVLQAPSILYGGRQNKAIATPIQGVWDMRNKQFHTGIEI
KVWAIACFAPQRQCTELLLKAFTDQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFKHL
KYTYQGLQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQVKNVQKTTPQTLSNLCLKIN
VKLGGVNNILLPQGRPLVFLQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCAT
VRVQQHRQDIIQDLATMVRELLIQFYKSTRFKPTRIIYYRDGISEGQFNQVRLEVLQHEL
LAIREACIKLEKDYQPGITFVVVQKRHHTRLFCMDRNERVGKSGNIPAGTTVDTKITHPS
EFDFYLCSHAGIQGTSRPSHYHVLWDDNHFTSDELQVLTYQLCHTYVRCTRSVSIPAPAY
YAHLVAFRARYHLVDKEHDSAEGSHTSGQSNGRDQQALAKAVQIHQDTLRTMYFA
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtattctagtggagctgctggagctgctgagatgcttgaaccacctcactcctcgggg
tcaattggctctgacccctctgatccagatcccccgtctcccccagtgccagagtatgtg
ttcaaacccccctcgcggccagactttggcaccatgggcaggacaatcaaactgcaggcc
aacttctttgagatggagatccccaaactggaggtctaccactacgacattgacatcaag
ccagagaaatgccccagaagggtcaaccgggaaattgtggagcacatggtacagcacttt
aaaacgcagatctttggggatcgaaagccagtgtatgacgggaggaagaatctctacaca
gccacgcccttacctataggcagggaaaaaaacacctgtgtccccaaacaggtggagctg
gaggtgaccatcccaggcgaggggaaagaccggaacttcaaagtggccataaagtgggtg
tcctgcgtcagtctgcaaactcttcaagaagccctgtctggacgactgccaaacatcccc
tttgagaccatccaggccctggatgtggtcatgagacatttgccctctatgaggtacacc
cccgttggacgttctttcttcaccccttcagagggatgctccaaccccctgggcgggggc
agggaggtctggtttgggttccaccaatcggttaggccttccctgtggaagatgatgcta
aacattgacgtgtcggccactgccttctacaaggcccagcctgtgattgagttcatgtgt
gaggttttggatttcaaaagtatcgaagaacaacagaaacccttaaccgactcccagaga
gtaaagtttaccaaggaaatcaaaggtaatcattcattaccaggtctgaaggttgagatc
actcactgtggtcagatgaaacggaagtacagagtatgtaatgttactagaagaccggcc
agccaccagacgtttccactgcagcaggagaatggccagaccatagaatgcacagtagcg
cagtacttcaaagacaagtacaaactcatactgcgctacccccacctcccctgtctacag
gtcggacaggagcagaaacacacctacctccccctcgaggtctgtaacatagtggctggc
cagcggtgcatcaagaagctgaccgacaatcaaacatccactatgatccgtgccacagcc
cgatcagcacctgaccgtcaggaagagatcagcaaactgatgagaagtgccaactttaac
aatgatccttacgtgcgtgagtttggggtgatggtgagggatgagatgaccgaggtgaac
ggcagagtcctccaggccccatccatcctctacggagggcggcagaataaagcaatagca
actcccatccagggagtgtgggacatgaggaacaagcagttccacactggcatagagatc
aaggtgtgggccatcgcctgcttcgccccacagagacagtgtactgaactcctgcttaag
gcgttcacagaccagctgcgtaagatctctcgcgacgcggggatgcccatccagggccaa
ccctgtttctgtaagtacgctcagggggcggacagcgtggagcccatgttcaaacacctg
aagtacacctaccagggcctgcagctggtggtggtcatcctgcctgggaagacaccagtc
tatgctgaggtgaagcgtgttggtgacacggtgctgggcatggccacccagtgtgtccag
gtcaagaatgttcagaaaaccactccccagaccctctctaacctctgcctgaagatcaac
gtcaagctgggcggggtcaacaacatcctcctcccacagggcaggcccctggtgttcctg
cagccagtcatcttcctgggtgctgatgtcactcaccctcctgctggagatgggaagaaa
ccctccatcgctgcagtggtggggagcatggacgcccaccccagccgctactgtgccacg
gtgcgggtgcagcagcatcgccaggacatcatccaggacctggccacaatggtcagagag
ctgctcatccagttctacaagtccacccgcttcaagcccacccggatcatctactaccgc
gacggcatatctgagggccagttcaaccaggttagacttgaggtgctccaacatgagtta
ctggcaatccgtgaggcctgcatcaaactggagaaggactaccagcccggtatcaccttc
gtggtggtgcagaagagacaccacactcgactgttctgcatggacagaaacgagagggtt
ggtaagagtggcaacatccctgcaggcaccacagtggacaccaaaatcactcacccatcg
gagtttgacttctatctgtgtagccatgctggcattcaggggaccagccgaccgtcccat
taccacgtgctgtgggacgacaaccatttcacctcggacgagctgcaggtgctaacctac
cagctgtgccacacctatgtgcgctgcacccgctccgtgtccatccctgcaccagcctac
tacgcccacctggtggcattccgtgcccgttaccacctggtggataaggagcatgacagt
gcggagggcagtcacacgtcgggacagagcaatgggcgtgaccagcaggctttggccaag
gccgttcagatccaccaggacacactgcgcactatgtacttcgcctga
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