KEGG   Oncorhynchus nerka (sockeye salmon): 115128702
Entry
115128702         CDS       T07952                                 
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03050  Proteasome
one03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    115128702
  09124 Replication and repair
   03440 Homologous recombination
    115128702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115128702
   04131 Membrane trafficking [BR:one04131]
    115128702
   03051 Proteasome [BR:one03051]
    115128702
   03400 DNA repair and recombination proteins [BR:one03400]
    115128702
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     115128702
Membrane trafficking [BR:one04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    115128702
Proteasome [BR:one03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     115128702
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     115128702
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 115128702
NCBI-ProteinID: XP_029514660
LinkDB
Position
LG4:60307515..60315793
AA seq 71 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETSQ
NT seq 216 nt   +upstreamnt  +downstreamnt
atgtctgacaagaaacagactgtagatttgggattattagaggaggacgatgagtttgaa
gaattcccagccgaggattggactgggttggatgaggatgaagatgcccacgtgtgggaa
gataactgggatgatgacaatgtagaggacgacttctctaatcaactaagagcggagctg
gagaaacatgggtacaagatggagacgtcgcagtag

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