Oncorhynchus nerka (sockeye salmon): 115128723
Help
Entry
115128723 CDS
T07952
Name
(RefSeq) ATP-dependent DNA helicase Q4-like isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
one03032
]
115128723
03400 DNA repair and recombination proteins [BR:
one03400
]
115128723
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115128723
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
115128723
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
115128723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
ResIII
zf-CCHC_3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
115128723
NCBI-ProteinID:
XP_029514695
LinkDB
All DBs
Position
LG4:61629679..61653077
Genome browser
AA seq
1568 aa
AA seq
DB search
MDRYNNVKILLKTWEQSFVQEHQRKPNQGDIDGAPEEAKKLYKEYRTLKQAKENGNNGHT
DPTPTAQTQSSEKESDCWGAHLNRKSMPVAAPKLTLTPKDKESLQASAQYFGMKLKSNLG
ALTKERPVSLKKSFTPRRTPLKSWKDGQSPNPAAGAAGSDTLLSPLLKPANTRPHLLACP
VQTGTEHPQQPFEPIPAFTPSKLWSPAAGASSSDRPAGSRAQQLRQTFTKRLSSVDSSWL
ERCQVFDEVGVVEKPVVGNLSLAVVSAVDSPPAKGGGVGEGENPGRAASSFVIPSMQKEG
TTLLGERASKSTMPQALPFSDEQQPKIGCGVTSAAVPASLRSTGQHSSLGSGSGEGKDGE
TRPGLRGQAEGGTSEETAIGASTAKKSRARARKGRVGRVEEEAEVSTQPPQKAEGDELGP
EKKGTKKKAKKRQRDLDTDGENPDNTEKEGAVKKRRTKKVTEATVDGRSPKKVPRVRKKA
QTGDGNASEQGSGDVTEKEAVKQKPRVPQENLLGEVDEEDVKAARNRGSNTMRPKPTKNS
DCNFVRINLKNKSHVKGYACRGAGLRKQLTMEKFQLKGERFGGPDSRFRGGRGGFRGGRG
RGGFRGGFGGFNHTGDTCFKCGGTGHWAMNCKGRVGAPVDSAAADEASAVEEPFELPTLE
EVARATGTLRSEPRVVPPIVKDENECLGEKQEDVGDEVLLNVIRPDYERLLPPPPMQPLY
PLGEDGKVQAVPSEVNEALKDFGYKSFRPGQEQAIMRILSGLSTLVVLSTGMGKSLCYQL
PAYLYAQRSNSITLVVSPLVSLMDDQLSGLPSKLKAAAIHSNMSKKQREVAIEKVKAGEV
HVLLLSPEALVGGGHSGSGCLPPADQLPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLR
DRLGVRCLLGLTATATLSTALDIAQNLGITDQDGVAVRSAAVPNNLQLSVSMDRDKDQAL
VCLLKGERFGSLESVIIYCTRREETTRISALLRTCLQGVLLKESNRTASQEADDNPVGKK
KKALARKKIRKPLKWMAESYHAGMSSSERRRVQNNFMCGELRVVVATVAFGMGLDKSDVR
GIVHYNMPKSFESYVQEIGRAGRDGEPAHCHLFLDPEGGDLHELRRHIYADTVDYYTVKK
IVQKVFPPCRCRQIHQNQQDLARTQEEVDDSEMMELMDTCDENPVETPEHTTETGQNTPV
EQLEQAKVPTEDVSTFQPLDGEQKHPPESSVPFPQRGDGEHEEEEQTGGGDDWPTTRVCH
THERAIPMQDTVEALDITEEGLETLLCYLELHPQQWVELLHPTLSTCKMVCYNGPHQLRK
LTKICPPVAVVLARKRLAGERVDTCDSVDFDVVEVADTMGWQLGLVKRGLRQLQWATNRG
VLVEFSNLSFYFRSYGDLTPDEMDRVCEFLHGRVVAQERTKLYQLKACFKAFRSVAFKSC
SVCTDKLDESRSLKLKGLLGDYFDKRRELDLSRKFQEEKDGEDEEELLLKCKMKDFEGQI
RADIQSFLGNRSDEKFSGRAVARIFFGIGSPCYPAQTFGRDKRYWRKYIQFDFNEIIRFA
IQEIIRFK
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatacaacaatgtgaagattcttctgaaaacctgggagcagtcatttgttcaa
gaacatcaaagaaagcccaaccagggtgatattgacggagccccagaagaggctaaaaag
ctctacaaagaatatcgaacactcaagcaagcaaaagaaaacggcaacaatgggcataca
gacccaacacctaccgcacagactcagtcatctgagaaggaatccgattgctggggcgct
cacctgaaccgtaagagcatgccggtggctgcccccaaactgacgctgacgcccaaggac
aaggagtccctccaagcctcggcccagtactttggcatgaagctcaagtcaaacctgggt
gctctaacaaaggagagaccggtttctctgaagaagtcgttcacgccacgtcgaacacct
ctgaagtcctggaaagacggccagagcccaaaccctgcagctggtgctgcaggcagcgat
acactgttatcccctctgctaaagccagccaacacacgtccacacctcctggcctgtcca
gtgcagacagggacagaacacccacagcagccctttgagccaataccagccttcacgccc
tccaagctgtggtctcctgcagcgggggcatcctcatcagacagaccggcaggaagtagg
gcccagcagctcagacagaccttcaccaagaggttatcctctgtagacagcagctggctc
gagagatgtcaggtgtttgacgaggtgggtgtcgtggagaagccggttgtgggtaatttg
tctctcgccgtggtgtcggcggtagattcaccaccggccaaagggggaggtgttggcgag
ggagagaacccaggacgtgcagccagttcctttgtcataccttccatgcagaaagaaggg
acaactctcctgggggagagggcttccaagagtaccatgccacaggctctgcctttttca
gacgagcaacagcccaaaattggttgtggcgtaacgtctgcagcagtcccagccagtctg
cggtccactggacaacactcctcattggggtctggctccggagagggaaaggatggagaa
accagaccaggtctcagaggacaggccgagggcggaacgtcagaagagacagccatcggc
gcctccacagccaagaaatctcgagcaagggccagaaaaggccgggtaggaagggttgaa
gaggaggcggaggtgtcgacgcagccaccacagaaggccgagggtgacgagctcgggccg
gagaagaaaggtacgaagaaaaaggccaaaaagaggcaaagggaccttgacacagatgga
gagaaccctgacaacacagagaaagagggggcggtgaaaaagaggagaaccaaaaaggtt
acagaggctacagttgatggcaggagtcccaaaaaagtccccagagtgaggaagaaggct
cagacgggtgatggaaatgctagtgagcaggggagtggtgatgtcacagagaaggaagca
gtgaagcagaaaccaagggttccacaggagaacctcctaggagaggtggatgaggaagat
gtcaaagctgccaggaacagagggagcaacactatgagacctaaacccaccaagaactcg
gactgtaactttgtaaggatcaacctgaaaaataagtctcatgtcaaaggatacgcatgt
aggggcgctggcctacggaagcagttgaccatggagaagttccagctaaagggggagagg
tttggaggaccagactcgcggtttagagggggcagaggagggtttagagggggaagaggc
agaggagggtttagaggtggcttcggagggttcaatcatacaggggacacctgcttcaag
tgtggaggcacaggacactgggctatgaactgtaagggcagagttggagctccagtagac
agtgctgctgctgatgaggcgtctgcggttgaggagcccttcgaactgccaaccttggaa
gaagttgcccgggcaacgggaactctgcgttccgagcctcgggtggtgccccccattgtt
aaagacgagaatgagtgtctgggggagaagcaggaagatgttggtgatgaggtcttgttg
aatgtgatcaggccggattacgagcgcctgctccctccgccccccatgcagcccctctac
cccctaggggaggacggcaaagtacaagcggtgccctctgaagttaatgaagcacttaaa
gactttgggtacaagtctttcagaccagggcaggaacaggccatcatgagaattctatca
ggtctgtccacgctagtggtgctctctacgggcatgggcaagtctctgtgctaccagctg
cctgcctacctctatgcccagaggtctaacagtatcactctggtggtgtcaccactggtg
tctcttatggatgatcagctttctggactcccatccaagctgaaagcggctgccattcac
tccaatatgtctaaaaaacagagagaggttgccattgagaaggttaaggcaggtgaggtc
catgtcctgctcctgtcccctgaggcgttggtaggtggaggtcactctggctctggctgt
cttcccccagctgaccagctccccccggtggccttcgcctgtatcgacgaggcccactgt
gtctcagagtggtcacacaactttaggccctgctacctgcgtctctgcaaggtgttgagg
gaccgtctgggcgtgcgttgcctgttgggtctgactgccaccgccaccctgtccaccgcc
ctggacatcgctcaaaacctgggcatcactgaccaggacggtgttgctgtccgctcagcc
gccgtgcctaacaacctgcagctgtctgtctccatggaccgagacaaggaccaggccctg
gtgtgtctgctgaagggagagcggtttgggtctctggaatccgtcatcatctactgcacc
aggagagaggagacgacccgtatatctgccctgctcaggacctgcctgcagggggtgctg
ttgaaggagtctaaccgtacagctagtcaggaggcagatgacaaccctgtagggaagaag
aagaaagctttggccaggaagaagatccgtaagcctctgaaatggatggctgagtcctac
catgctggcatgtcgtcctctgagcgccgtcgcgtccagaacaacttcatgtgtggtgag
ctgcgagtggtggtcgccacggtagccttcggcatgggcctggacaagtcggacgtgcgc
ggcatcgtgcactacaacatgcccaagagctttgagagctacgtgcaggagatcgggagg
gcagggagagatggggaaccggcccactgtcatctcttcctggatcctgagggaggggac
ctgcatgagttgcggaggcacatctatgccgatacggtggattactatactgtgaagaag
atagtgcagaaggtgtttcctccctgcaggtgcagacagatccaccagaaccagcaggac
ctagccaggactcaggaggaggttgatgactccgagatgatggaactgatggacacctgt
gatgagaacccagttgaaacaccggaacacacaacagagactggtcagaacacccccgtc
gagcagttggaacaggccaaagttcctactgaggatgtatcaacttttcaaccactggac
ggggagcagaaacacccaccagagtcaagtgttccatttccccagagaggggatggcgaa
catgaagaggaggagcagacagggggaggtgatgattggcccacgactagggtgtgtcac
acccatgagagggccatacctatgcaggacactgtggaagccctggacatcactgaggaa
ggtttggagactctgctgtgctatctggagctgcaccctcagcagtgggtagagctgctc
caccccaccctctccacctgtaagatggtctgttacaacggcccgcatcaactccgcaaa
ctcaccaaaatctgcccacctgttgccgtagtgttagcccgaaaacggctggcaggggag
cgagtggacacctgtgattcggtcgactttgatgtggtggaggtggcagacactatgggc
tggcagctgggtctggtgaagagaggcctcagacaactacagtgggccacaaacagagga
gtcttggtggagttctccaacctgtccttctacttccgttcctacggtgatttgaccccg
gatgagatggaccgggtgtgtgagttcctgcatggcagggtagtggcccaggagaggacc
aaactgtaccagctcaaagcctgcttcaaggccttccgcagcgttgcattcaagagctgc
agtgtctgtacggacaagctggacgagagcagaagcctgaagctgaaagggcttctgggg
gattactttgataagaggagagaactggacctgagcaggaagttccaggaggagaaggat
ggcgaggacgaggaggagctgttgttgaaatgcaagatgaaggactttgagggtcagatc
agagcagacattcagagtttcctgggcaaccgcagtgatgagaagttctctggcagagcc
gtcgctagaatattctttggaattgggagtccatgttacccagctcagaccttcggcagg
gacaagagatactggagaaaatacatccaatttgattttaatgaaatcatccgctttgct
attcaggagatcattcgattcaagtga
DBGET
integrated database retrieval system
