Oncorhynchus nerka (sockeye salmon): 115128747
Help
Entry
115128747 CDS
T07952
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115128747
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115128747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
HlyD_D4
Motif
Other DBs
NCBI-GeneID:
115128747
NCBI-ProteinID:
XP_029514745
LinkDB
All DBs
Position
LG4:63779779..63814142
Genome browser
AA seq
536 aa
AA seq
DB search
MRQWCLPAAVPRPEPMPTGRLSPPLSDVRMECCEVEPRYTIEQIDLLQRLRLSGMTKPQI
VQALESLERLDPDHRPPYCNDTRAANPTTNTTPTTASAPAPSSSSSSSSSSSLSLASATT
QTPGLDGASLSPSNSYEASPPPLYPHGVGVQKSFSYDIMAEEDWDLEEKVEEYMRRDSNL
VKEEIKTFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNNP
GLRWSESQHGPAGLGPGLGGLGQGLCGLGQGLGQNLGQNLGSGPARGGDRDVTGMVGNAA
TGATAAATTSTTWGRQRELLMHLLPWYTAAAQQAQPGATLSMRSLVKEEPDWRTGVSPGE
RGGVAGGPLRLRRGSRFTWRKECQSIMESFFMENQYPDEAKREEIANACNSVIQKPGCKL
SEFERVTALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCQSNGEELEPQDFTEQ
VNQRFIEQEEISSGKDLDLQDTSSLAAVEVLPPPIPTSQVLEQKADESKRETVDEE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgcctcccggctgcggtaccgcgacccgaaccgatgcccacagggcgc
ctctcacccccactatcagatgtgaggatggagtgttgtgaggtggagccacgctatacc
atcgagcagatcgacctccttcagcgtctccgtctctcagggatgaccaagccacagata
gtccaggccttggagtccctagagcggctagatcccgaccatcggcccccgtactgcaac
gacacccgcgccgccaaccccacaaccaacactacccctaccacagcctccgccccagcc
ccctcctcctcttcctcctcctcctcttcttcctctctctccttggcatccgccacaacg
cagacccctgggctagacggcgcctcactgtcgcctagcaacagctatgaggcctctccc
ccaccactgtacccacatggggttggagttcagaagtcgtttagctatgacatcatggca
gaggaggactgggatctggaggagaaggtggaggagtacatgaggagggacagtaacctg
gtgaaggaggagattaaaaccttcctcaacaaccgcaggatctcccaggccatcgtggga
caggtgacaggtatcagtcagagctatatatctcagtggttgctgcagcagggcttggag
atgagtgactccaaacgcagagccttctaccgctggtacctgcttgagagaaacaaccca
gggctgagatggagtgaaagccagcacggcccggcgggtctgggcccagggctcggtggt
ctcggccaggggctctgtggtctcggccaggggttgggccagaacctgggccagaacctg
ggctctggacccgccaggggaggggacagagacgtcacagggatggtgggaaacgccgct
acgggcgccacggccgcggccactacctctaccacctggggcagacagagagagctgctg
atgcacctcctcccatggtacactgctgccgcacagcaggcacagccaggtgctaccctg
tcgatgcgctccctggtgaaggaggagcctgattggaggacgggggtcagccctggggag
aggggcggggtggcgggcggtcctctgaggctgcggaggggaagcaggttcacctggagg
aaggagtgccagtcaatcatggagagtttcttcatggagaaccagtaccctgatgaagcg
aagagagaggagatcgctaacgcctgcaactcagtcatacagaaacctggatgcaagctg
tctgagttcgagcgtgtcacggctctgaaagtgtacaactggttcgccaaccgccggaag
gagatgaagagacgggctaatatagaggcagccatcttggagagtcatggtatcgaggtt
ccaagcccgagctgtcaatccaacggggaggagttggaaccacaggacttcacagagcaa
gtgaatcaacgattcatagagcaggaagagatatcttccgggaaggaccttgatctacaa
gacacctcctcattggctgccgtcgaggtccttccccctccaatccccacctctcaggtt
ctggaacagaaagctgacgaatcgaagagagagacagtggacgaggagtga
DBGET
integrated database retrieval system
