Oncorhynchus nerka (sockeye salmon): 115128773
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Entry
115128773 CDS
T07952
Name
(RefSeq) POU domain, class 2, transcription factor 2-like
KO
K09364
POU domain transcription factor, class 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115128773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115128773
03021 Transcription machinery [BR:
one03021
]
115128773
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115128773
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115128773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
115128773
NCBI-ProteinID:
XP_029514769
LinkDB
All DBs
Position
LG4:complement(45143005..45157329)
Genome browser
AA seq
432 aa
AA seq
DB search
MEGRGRKDIMMSKPAEDEKPGADFPGESTDSERNSPDANDQVQPMKTSPFSLSPTLSSIK
SKSEAVPEMISTHVPPPSQQQTPHPHTQLMLAGSQLAGDIQQLLQLQQLVLMPGHHLQSP
QFLLPQAQGQQGQQGKWDLLSKWEPPSSTLSLPLGTKHHVELGVRRHGDGLSSLQRDKSG
DGGVTSGASAAPMTSVTSGPHGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLY
GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMAIDSMLPSPNSLSSPMMGFEG
MPGRRRKKRTSIETNVRVALERNFILNQKPNSEEILLMGKQLNMEKEVIRVWFCNRRQKE
KRINPCSATPPLPSQPPSMTHKTPCYSPHMVSSQGLHQAATSLSTTVTSPLPSVTCPLTP
CGSAATSSTPSL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaggggaagaaaagatatcatgatgtcaaaaccagcagaggatgagaagcct
ggggcagactttccaggggagagcacagactctgagaggaacagtcctgatgccaatgat
caggttcagccaatgaaaacgagtcccttcagtctttctcctaccttgagcagcatcaag
agtaaaagtgaggcagtacctgagatgatctccacccatgtgccgcctccttcccagcag
cagacgcctcaccctcacacacaactcatgttggcagggagtcagctggcaggggatatc
cagcagctgttgcagctgcagcagttagtcctgatgcccggccaccacctgcagtctcct
cagttcctcctgcctcaggcccagggacaacaggggcagcagggtaagtgggacctacta
agtaagtgggaaccaccatcatcaacactgtcacttcctcttggcacaaaacatcatgta
gagcttggtgttcgtcgccatggtgatggcctctcatctttacagagggacaagagcggg
gacggcggggtgacctccggggcctcggcagcccccatgacctcagtgacctctggccct
cacggcgaggagcccagtgacctggaggagctggagcagttcgcccgcaccttcaaacag
agacgcatcaaactgggcttcacacagggtgacgtaggcatggcgatgggaaaactgtat
gggaatgacttcagccagaccacaatctctcgcttcgaggccctaaacctgagctttaag
aacatgtgcaagctcaagcctctgcttgagaagtggctaaacgatgcggagaccatggcg
atagacagcatgcttcccagcccgaactctctctcctcccccatgatggggtttgagggc
atgccggggcgtcgcaggaagaaacgcaccagcatcgagaccaacgtccgcgtggcctta
gagcgcaatttcatcttgaaccagaagcctaactcagaggagattctcctgatgggaaag
cagctcaacatggagaaggaggtgattcgggtctggttctgcaaccggcgccagaaagag
aagcgcatcaacccttgcagtgccacccctcccctgcccagccagcccccttccatgacg
cacaaaaccccctgctacagcccgcacatggtgtccagtcaggggctgcaccaggctgcc
accagcctcagcacaacagtgaccagtccattaccctcggtgacctgccctctgaccccc
tgtggctctgcagccaccagctccaccccctccctctag
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