Oncorhynchus nerka (sockeye salmon): 115128800
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Entry
115128800 CDS
T07952
Name
(RefSeq) iroquois-class homeodomain protein irx-4-A-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115128800
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115128800
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115128800
NCBI-ProteinID:
XP_029514787
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Position
LG4:complement(55186748..55190296)
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AA seq
443 aa
AA seq
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MAYPQLGYPYSPTHQFLMSTSSLASCFEPGGRSLLDSGVTHPSPQPLRCPAYESRLLGSP
GQEIPTPAIGLGVYGAGYGKSQGYYGTCGGDATALYARGTLESKDGASAHVGASQTPAYY
PYDYAFGQYPYDRYGYGSSVDSAAARRKNATRETTSTLKAWLQEHQKNPYPTKGEKIMLA
IITKMTLTQVSTWFANARRRLKKENKVTWSPRANKSSDERGCEDDSDGVEGSQEEEPIKR
EIDVDDSVTGRCVDLKQSELEDFDLLESDGSDCDPKHPFHTKDTPVHTPPDQRHHPKDPS
NSPLTHTPDTLRHGNERLPQSADCLKNTPDHDRTTNSFYTQRDLRSTESSKPNIWSIAQT
AAIQPEFPPCMHTATPSEALSPGGYLTEVPNLKVRAAEQQDSPVATLRDWVDGVFHDPLF
RQSSFKPVLSKSAMDRVWIGLNG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcttacccgcagctaggatacccctattcacccacacaccagttcctcatgagcacg
agctctttggccagctgcttcgagcctggcggaaggtctctcctggactcaggtgtgacg
catccctctccccagcctcttcggtgcccagcgtacgagagcaggctgctcggctccccg
ggccaggagataccaaccccggctataggtctgggtgtgtatggagctggctatggaaag
agccaagggtactatggcacctgcggaggcgacgcaacagctctgtatgccaggggaacc
ttggagtccaaagatggagcgtctgcacatgtgggggcctctcaaacccctgcatactat
ccatatgattacgcatttgggcagtatccatatgaccgatatgggtatgggtcatctgtg
gacagtgccgcagcacggaggaagaacgccaccagggagaccaccagcactctgaaggcc
tggctgcaggagcaccagaagaacccgtatcccaccaagggagagaagatcatgctggcc
atcatcaccaagatgacacttacacaggtgtccacgtggtttgccaatgcacggcggagg
ttgaagaaggagaacaaagtcacatggtcaccacgagccaataaaagctctgatgagagg
ggctgtgaagatgacagtgatggtgtggagggatcgcaagaggaggagccaattaaacgc
gagatagatgttgatgactctgtaacggggaggtgtgtggacctaaaacagagtgaactg
gaggactttgatctgctggagtcagatggttctgactgcgaccctaaacacccgtttcac
accaaagacaccccagtacacacaccaccggaccagcgccaccaccccaaagacccttcc
aacagcccactcacacataccccagacacactccgacacgggaatgaacgattgccacag
tcagcagattgcctcaaaaacacaccagaccacgaccgaacaaccaactcattctacact
caacgggacctgcgaagtacagagagcagcaaacctaacatctggtccattgcacaaact
gctgctatccaacctgagttccctccatgcatgcacacagccacccccagcgaggccctc
tccccaggggggtatctgaccgaagtacccaacctgaaggtgagggcggctgagcagcag
gactcgccagtggctactctgagagattgggtggacggggtattccacgaccccctgttc
agacagagttcctttaaacctgtgctgtccaagtcagccatggacagggtgtggattggg
ttaaatggatag
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