Oncorhynchus nerka (sockeye salmon): 115128808
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Entry
115128808 CDS
T07952
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
one04261
Adrenergic signaling in cardiomyocytes
one04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115128808
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115128808
09158 Development and regeneration
04382 Cornified envelope formation
115128808
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115128808
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115128808
03036 Chromosome and associated proteins [BR:
one03036
]
115128808
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115128808
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115128808
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115128808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P2R3B_EF-hand
EF-hand_13
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
115128808
NCBI-ProteinID:
XP_029514827
LinkDB
All DBs
Position
LG1:1597270..1664838
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AA seq
580 aa
AA seq
DB search
MEVNNMPSPQVLQPVLKMKVDELFLNWLSEPTTQTILKDYLGLIKSGQSIDLGLGDTKDK
RSMTFNENNNVASKRSLTERSSAPLGAPSSPPSTHTLPSGSSGNARIVGPNGRALRRSVS
TKKAQVKSEAPVPTALSESIPKFYFPRGRPKANLNIDGLIAKIEKIFSQFPNERATIEDM
GKVAKACECPLYWKAPLFNSAGGDRTGFVSVHKFVAMWRKMLQTCHDDVSKFVHLLAKPG
CNYLEQEDFIPFLQDVVNSHAGLAFLKEASDFHSRYITTVAQRIFYNVNRSWSGRISCSE
LRKSSFLQNVALLEQEEDVNQLTEFFSYEHFYVIYCKFWELDTDHDLYIDQRDLARHNDQ
AISHKMIERIFSGTVTRDRRLRKDGRLSYADFVWFLISEEDKKTDTSIEYWFRCMDLDGD
GVLSMYELEYFYEEQCVKLETMAIEPLPFEDCLCQMLDLVKPEVEGKITLRDLKQCKLSH
IFYDTFFNIEKYLDHEQKDPFSVVREAETEGQEISDWEKYAAEEYDILVAEETTTDQYND
GYDNALSHISSELCLRTEERHFFEIPNPHCNLDLDEDDFE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaacaacatgccatcgccacaagtcctgcaaccggtgcttaaaatgaaagtg
gatgagctcttcctcaactggttgagtgagccaacgacccagacgatactcaaagactac
ctcggcctgatcaagagtggacagagcattgatctggggcttggggacactaaggacaaa
aggtcaatgaccttcaatgagaacaacaatgtggcgtccaagagaagtctgacggagagg
tcttctgcacccctcggtgcgccttccagccccccctctacacacacactaccctctggg
agcagtggtaatgccagaattgtgggacccaatgggagggctctacggaggtctgtcagc
actaaaaaggcccaggtgaagagcgaggcgcctgttcccacggcgctgagtgaaagcatt
ccaaagttctactttccgcgggggcggcccaaagccaacctcaacatcgacggcctcatt
gctaagatagagaaaatattttcccaattccccaatgaaagggccaccattgaggacatg
gggaaggttgccaaggcgtgcgagtgtccgctctactggaaagccccattgttcaattcg
gctggaggcgataggacgggcttcgtgtccgttcacaagtttgtggccatgtggagaaaa
atgctgcagacctgtcatgacgacgtgtctaagtttgtacacctcttggccaaacctggc
tgtaattacctggaacaagaggactttattccattcctgcaggatgtggtgaactctcac
gcaggcctggccttcctgaaggaggcgtccgacttccactcacgctacatcaccacagtt
gcccagaggatattctacaatgtgaacaggtcatggtcaggcaggatcagctgttcagag
ctcaggaaaagcagctttctccagaacgtggccctgctcgagcaggaggaggacgtgaac
cagctaacagagttcttctcctacgaacatttctacgtcatctactgcaagttctgggag
ctggacacagaccatgacctatacatagaccagagagacctggcccgacacaacgaccaa
gccatctcccacaagatgattgaaagaatcttttctgggacagttaccagggatagacgt
ctgcgtaaagacggcaggctgagctacgctgactttgtctggttcctcatctccgaagaa
gacaagaagactgacaccagtatagagtactggttccggtgtatggacctggatggggac
ggtgtgttgtctatgtacgagctggagtatttctatgaggagcagtgtgtgaagttggag
accatggcaatcgagcccctgcccttcgaggactgtctctgtcagatgctcgacctggtc
aagccggaggtcgagggaaagatcaccctacgggacctgaagcagtgtaagttgtctcac
atcttctatgacaccttcttcaacatcgagaaatacctggaccacgagcagaaagacccc
ttctctgttgtaagggaggctgagacagagggccaagagatctcggactgggaaaaatat
gctgcggaggagtacgatatcctggttgccgaggagactactactgatcagtacaacgac
gggtatgacaatgctctgagtcacatctccagtgaattgtgtctgaggacagaggagaga
catttctttgagatccccaaccctcactgcaatctggacttggatgaggacgactttgaa
taa
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