Oncorhynchus nerka (sockeye salmon): 115128821
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Entry
115128821 CDS
T07952
Symbol
elp2
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115128821 (elp2)
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
115128821 (elp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Rax2
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
DUF7837
Motif
Other DBs
NCBI-GeneID:
115128821
NCBI-ProteinID:
XP_029514806
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Position
LG4:complement(60920699..60968401)
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AA seq
786 aa
AA seq
DB search
MAAPIIETCHVACCANRTPNVLSWGRGGLIAYGTCNSVALYDPQEKCVVAVLNGHTGRVN
TVQWVHREDCGRETHLVSGGSDSLLIVWEAQDGKFKQYVECVGHTGPVCAVDAIHLDNNK
LLIASTASDSTVKLWLYTGSKAECTHTISFGSGFMMDVSLAWLPGSRVPILACGGDDCRI
HLYAQCNGQFRKVLSLQGHEDWIRGVEWACVDGDLLLASCAQDCLIRVWRLVAKSRTKRN
AQEERTIRMSEDVFTLTQNDASSAFAVTLESVLAGHENKVYGVHWQPPVIKGGDQHQSLS
LLSASMDKTMILWAQEEGSGVWVEQVRVGEVGGNTLGFYGCQMSPDGSMILAHAFHGALH
LWTQSHGKEGEWRPGVVISGHFNAVQDLSWDPEGEFILSVGSDQTTRLLTPWKRMDQTQP
TWHEISRPQIHGYDMQCLAMVGRFQYVSGADEKVLRVFRAPRNFVENFANISGTSLAKLL
AFSDTVDQPEGASTPALGLSNKAVFQGDLTPKTNEEEGTGFNSVSDQYQESYFHPFTLNE
PPPEDHLLQNTLWPEVQKLYGHGFEMFCLASDSGRTVVASACKASKAEHAAVLLWSSTSW
RQLQALPCHSLTVTQMAFSPNGLFLLAVSRDRTWSLWKRDDPAATPTNTEPHFSLYTSTR
KDTAVHTRIIWSCDWSADNKYFVTSSRDKKVIVWGDCSSCEAIVTPDEPPVIRPCSSILD
VGDSATAVSFCPILCPGNSYLLAVGLESGQVLLYKWELSEEPAGASDWTRYGETDSSYPL
DTHTGS
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccataatagaaacatgtcatgtcgcatgttgtgcaaatcgaaccccaaat
gttctttcatggggtcgtggggggctcattgcatatggaacatgcaattctgtcgctctc
tatgacccacaggagaagtgtgttgttgctgtcctcaatggacataccgggagggtgaac
acagtccagtgggtccacagagaggactgtggtagagaaactcacctggtgtcaggaggg
tctgacagtctactgattgtgtgggaggcccaagatggaaagtttaaacagtatgttgag
tgtgttgggcataccggaccagtgtgtgctgtggatgccatccacctggacaacaataag
ctactcatcgcctccacagcctccgactccactgtaaaactatggctctacactgggagt
aaagcggagtgcacccataccatatcctttgggagcgggtttatgatggatgtctcgcta
gcgtggttgccaggcagcagagttcccatacttgcctgcgggggcgacgattgcagaatc
catttgtatgcacagtgcaatggacagttcaggaaagtcctctccttgcaagggcatgag
gattggatccgtggtgtggagtgggcctgtgtagacggggatctgttactggccagctgt
gctcaggactgtctgatccgggtttggaggctggttgccaagtctaggacgaagagaaac
gcacaggaagaacgcaccattaggatgtctgaagatgtctttacactgacacagaacgat
gcgtcctcagcatttgcagtgacgctagagtcagtccttgccggccacgagaacaaggtc
tatggagtccactggcagccccctgtcatcaaaggtggcgaccagcaccagtctctgagc
ctgctctctgcttccatggacaagaccatgatcctgtgggctcaggaggaaggctcaggg
gtgtgggtggagcaggtgcgtgtaggggaggtggggggaaacacactgggtttctatggt
tgtcagatgagtccagacggatccatgatcctggcccatgccttccacggagcgctgcat
ctctggacccagagccacggcaaagagggagagtggagaccaggagtggtgatatctggt
cacttcaacgcagttcaggacctgagctgggaccctgagggggaattcatcctcagtgtg
gggtcagaccagaccacaaggctattaacaccctggaagaggatggaccaaacacagcct
acctggcacgagatctctcgcccccagatccacggctatgacatgcagtgtctggccatg
gtgggccgcttccagtacgtctccggggccgacgagaaggtcctccgggtgttccgcgcc
ccacgcaactttgtggagaactttgcaaacatctctggcacttctctggcgaaactgctg
gccttcagtgacactgtagatcaaccagaaggggccagtacccctgccctaggtctctcc
aacaaggctgtgtttcaaggtgatcttactcccaagaccaatgaagaggagggaaccggg
ttcaacagtgtttctgaccaataccaagagtcctacttccacccgttcacccttaatgag
ccaccgccagaggaccacctccttcaaaacacactatggcctgaggtccaaaaactgtat
ggacatggctttgagatgttctgtctggcgtctgacagtgggaggacggtggtggcttcg
gcatgtaaggcctctaaggctgagcatgcggccgtgctgctctggagctccacttcctgg
cgccagctacaggcgctgccctgccacagcctcactgtcacccagatggccttctctccc
aatggactgttcctattggccgtgtcccgggacaggacctggtcgctatggaaacgggac
gaccccgccgccacccctacaaacacagagccccatttctccctgtacacatctaccagg
aaggacacggccgtacacacgcgcatcatatggtcatgtgactggagtgccgacaacaag
tactttgtgacgtcgagtcgagacaagaaggtgatcgtgtggggtgactgcagcagttgt
gaggccattgtgacccctgatgaacccccagtcatccggccctgttcctccatattagat
gtaggagactcggccactgctgtctccttctgccccatcctgtgccccggcaacagctat
ctgctggcggtggggctggagagtggccaggtcctgctgtataagtgggaactcagtgag
gagcctgctggagcatcagactggaccagatatggagaaacagactcctcgtatccttta
gacacacacaccgggagctaa
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