Oncorhynchus nerka (sockeye salmon): 115128953
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Entry
115128953 CDS
T07952
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like
KO
K09663
beta-1,6-N-acetylglucosaminyltransferase 4 [EC:2.4.1.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00512
Mucin type O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
115128953
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115128953
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115128953
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GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
115128953
NCBI-ProteinID:
XP_029514951
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Position
LG4:complement(30405472..30410148)
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AA seq
450 aa
AA seq
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MKIRFAFPSRLRKKNFISSLSLLLVICAFLLLFLKFTVKYSITIETYGSTAGYNDVELLH
RYNIDCNAIYEMEPAELGKSLVIRKQVVVEEQDKSLVNLISNCPRYLRSRGYGDVQVSEE
EQAFPLAYSLVVHKSASMVEKILRAVYTPNNIYCIHYDLKSSELFRESMEGLARCLPNVF
IASKLEAVTYASISRLNADLNCLSDLIGSKVKWKYVINLCGQDFPLRSNIELVADLKKLR
GGNMMETSRPSEYKKQRFSFHHELQNASFEYHRLPVKTNKAKGPPPHGIQMFIGSAYFVL
SLEFVTYMNKSALARDFLMWSNDTYSPDEHFWATLTRVPGVPGEVPRAQADITDLMSKTR
LVKWNYLEGPLYPSCTGKHVRSVCIYGAGELRWLLNYGSWFANKVDAKVDPVLIQCLEDK
LQEKQRLLVKAMKSQQKIPSSVLAVDFILQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataagatttgcctttccaagcagactgcggaagaagaatttcatttcttcttta
tcattgctgctggtgatctgtgccttcttgctgctcttcctaaagttcactgttaaatac
agcattaccattgaaacctatgggtctaccgcaggctacaatgacgttgagctgctccat
cgctacaacattgactgcaatgccatctatgaaatggagccggccgagttggggaagtcg
ctggtcatcagaaaacaggtggtggtggaagagcaggacaagagcttggtcaacctgatc
tccaattgcccgcgatacctccgctcccggggctatggggatgtccaagtgtctgaggag
gagcaggccttccccctggcctactcactggtggtccacaagtctgcctccatggtggag
aagatcctcagggctgtctacacccctaacaacatctactgtatccactacgacctgaag
tcatcagaactgttcagagagtccatggagggtctggcacgctgtctacccaacgtcttc
atcgcctctaagctggaggcagtgacgtacgccagcatcagccgcctcaatgctgacctc
aactgcctgtctgaccttataggatcaaaggtcaagtggaagtatgtcatcaacctgtgc
ggtcaggactttcccctgcgctccaacatagagctggtggctgacctgaagaagctccgg
gggggtaacatgatggagacaagtcgccccagcgaatacaaaaagcagcgcttctccttc
caccacgagctgcagaacgcgtcattcgagtaccaccggctgccggtgaaaaccaacaag
gccaaggggcctccgccgcacggcatacagatgttcatcggcagcgcgtacttcgtgctc
tcgctggagttcgtcacttatatgaacaagtctgcactggccagggacttcctgatgtgg
tcaaatgacacctactccccagacgaacacttctgggccacgctgacacgagtgccgggc
gtgccaggtgaggtgccacgggcccaggccgacatcacagacctgatgagcaagaccagg
ctggtgaagtggaactacctggagggaccgctttacccatcatgcacagggaaacacgtc
cgcagtgtgtgtatctatggggcgggggagctgcgctggctactgaactacggcagctgg
ttcgctaataaggtggacgccaaagttgacccggtccttatccaatgtcttgaggataaa
ttacaggagaaacagagactcttggtcaaggctatgaagtcacaacaaaagattccctcc
tctgtgttagcagttgattttattcttcaataa
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