Oncorhynchus nerka (sockeye salmon): 115128983
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Entry
115128983 CDS
T07952
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04020
Calcium signaling pathway
one04080
Neuroactive ligand-receptor interaction
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115128983
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115128983
04081 Hormone signaling
115128983
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
one04030
]
115128983
G protein-coupled receptors [BR:
one04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
115128983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Srx
7tm_4
Bac_export_2
DUF6556
DUF4834
Motif
Other DBs
NCBI-GeneID:
115128983
NCBI-ProteinID:
XP_029514979
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Position
LG4:40193717..40198816
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AA seq
399 aa
AA seq
DB search
MENVTEAQENQTWGTWTDQIIEYKVVSTLLVFVICAFGIVGNVMVILVVLTTKHMRTPTN
CYLVSLAVADLIVLTAAGLPNITDSIFGSWVFGRSGCLGITYLQYLGINASSCSITAFTI
ERYIAICHPIKAQLLCTLSRAKKIILFVWVFTLLYSVMWFYLSDIKEESYENDVTIVTCS
YKVSRQLYLPIYFLDFGIFFVVPLMLATILYGLIARILIMNPLPSERKDKSKKEQSNTTR
GCKNSHHTSTTATSRRQVTKMLAVVVILFAVLWMPYRTLVVVNSFLEQAYMNTWFILFCR
SCVYINSAINPIIYNAMSQKFRAAFRKLCLCGRKGSEKPTGGTSSVALTYSVVKDTSMVE
TTDQFNTELDEIMVTCELPDKKMVFQDTCVHDKVTLCND
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgttactgaagctcaagaaaatcagacttgggggacttggacggaccaaata
atcgaatacaaagtcgtgagcactttgttagttttcgtgatatgcgcctttgggatcgtt
ggtaatgttatggtgatcttagtggtgcttaccactaaacacatgaggacacccaccaac
tgctacctggtgagcttggccgttgcagatctcatcgtactaactgcggcgggcttaccg
aatatcactgacagcatcttcgggtcttgggtgttcggccgctcaggatgtctcggaatc
acctacctccagtacctgggaatcaatgcatcgtcctgctctatcaccgcctttaccatc
gaaaggtacatcgctatttgccacccgataaaagcccagttgctgtgcacactgtccaga
gccaagaagataatattgtttgtctgggttttcactttactttactccgtcatgtggttc
tacctgtcagatatcaaagaagaatcatatgagaacgacgtgaccatcgtgacatgcagc
tacaaagtttcaagacaactctatttgcccatttactttttggatttcgggatatttttt
gttgtgccgcttatgctggcaaccattctgtatggtctcatcgccagaatcctgatcatg
aatccgttaccttctgaacgcaaggataaaagtaaaaaggaacaaagcaacacaacgagg
ggatgtaaaaactcccaccacaccagcactaccgctacttctcggagacaggtgaccaag
atgctggctgtggtggtgatcctgttcgctgtgctgtggatgccgtaccgcaccctggtg
gtggtaaactccttcctggagcaggcctacatgaatacctggtttatcctcttctgtcgg
agctgtgtctacatcaacagcgcaatcaaccccatcatctacaatgctatgtcgcagaag
ttccgtgccgccttccgcaagctctgcctctgtggacggaaaggctctgagaagcctacc
ggcggcacgtccagcgtggcgctgacctacagcgtggtcaaggacacatctatggtggag
actacggaccaattcaacacagagctggacgagatcatggtaacctgtgagttgcctgac
aagaagatggtgtttcaggacacctgtgtgcacgacaaggtgactttatgcaatgactga
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