Oncorhynchus nerka (sockeye salmon): 115129129
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Entry
115129129 CDS
T07952
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04810
Regulation of actin cytoskeleton
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115129129
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115129129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115129129
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115129129
Factors involved in mRNA localization
Other mRNA localization factors
115129129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
115129129
NCBI-ProteinID:
XP_029515095
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Position
LG5:complement(1919720..1952950)
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AA seq
859 aa
AA seq
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MLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVTKLMKFMYFQRK
AIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCSVKNDHSAYKRA
AQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLADIVNISVDYYEN
KMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFKLQVVPLFGDMQ
IELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFISELARYSNSEVV
TGSGLDSHKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDKFCNKDCPGTAE
EYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYAALQDFAQMTLR
EPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGGFDIKVPRRAVG
PSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFFTHLLNFSAVVL
RVLPLLQGTILQYVKTLIEVMPKICRLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQ
SLREVGNAILFCLLIEQALSQEEVCDLLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYA
PLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMFEVILTRIRSFLQDAVWRGPPPT
NGVMHVDECMEFHRLWSAMQFVYCIPVGTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFD
LFDFCYHLLKVQRQDSKDEIIKNVPLKKMADRIRKYQILNNEIFAILNKYMKAVETDSST
VEHVRCFQPPIHQSLATTC
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggagggccatgagtatgctgtcatgctctacacctggagaagctgctcaaga
gctataccacaggtgaagtgtaatgagcagcccaacagggtggagatctatgagaagact
gtggaggtgctggaaccagaggtcaccaagctcatgaagttcatgtactttcagcgtaag
gccatcgagcgtttctgcggggaggtgaagcgtctctgccacgctgagcggaggaaggac
ttcgtctctgaagcctacctcctcaccctgggcaagttcatcaacatgttcgctgtgctc
gacgaactcaagaacatgaagtgcagcgtcaagaacgaccactctgcctataaaagggca
gctcagttcctgaggaagatggctgaccctcagtccatccaggagtcacagaacctctct
atgtttctagccaatcacaacaggattactcagtgtctgcagcagcagttggaggtgatt
cctggctatgaggagttgttagcagacattgtcaacatcagtgttgattactatgagaac
aagatgtacctgacgcccagcgagaaacacatgctgctcaaggtgatgggttttggtctc
tatctgatggacggtaacgtcagtaacatctacaaactagacgccaagaagaggatcaac
ctgggaaagatcgacaagttcttcaagctgcaggtggtgcctctgtttggagatatgcag
atagaactatcacgttacatagagaccagcgcccactacgaggagaacaagtccaagtgg
acgtgtacccagagctccatctctccccagtacaacctgtgtgagcagatggttcagatt
cgtgatgaccacatccggttcatctctgagctggctcgctacagtaacagtgaggtagtg
accgggtcaggcctggacagtcacaagtcagatgaggagtacagggaactgtttgacctg
gcactcagagggttacagctgctgtccaagtggagcacacacgtcatggaagtgtactcg
tggaagctggtccacccgactgataagttctgtaacaaggactgtcctggcacagcggag
gagtatgagagagctacacgttacaactacacctcagaggagaagtttgccctggtcgag
gtcatcgccatgatcaagggactgcaggtgttgatgggtcgtatggagagcgtattcaac
caggccataaggaacaccatctatgcagccctgcaggactttgcccagatgaccctcaga
gagcctctacgtcaggccgtacgcaagaagaagaacgttctcatcagtgtcctgcaggcg
atccgtaagaccatctgtgactgggagggggctcgggagcctcccaatgacccttgtctc
aggggggagaaggaccccaagggagggttcgacatcaaggtgccccgcagagctgtggga
ccctcgagcacacagctgtacatggttcgtaccatgctggagtcgttgatagctgataag
agtggttctaagaagactctacgcagcagtctggatggacccatagtactggctatagaa
gacttccacaaacactccttcttcttcacacacctgctcaacttcagcgctgtggttctg
agagttcttcctctattgcagggcactatcctgcagtatgtgaagactctgatcgaggtg
atgcctaagatctgtcgcctgccgcgccacgagtacggatccccaggtatcctggagttc
ttccaccaccagctgaaggacattatagagtacgcagagctgaagacagatgtcttccag
agtctcagagaggtcgggaacgccatcctcttctgtctgctcatcgaacaagctctgtcc
caggaggaggtgtgtgacctgcttcatgcagctcccttccagaacatcctccccagggtc
tacatcaaagagggggagcgtctggaagtcaggatgaagaggctggaggctaagtatgct
ccactccatctggtgcccctcatcgagaggctggggacccctcagcaaatagctatagcc
cgtgagggggatctgttgaccaaggagcgtctttgctgtggcctgtccatgttcgaggtg
atccttacaaggatccgtagtttcctgcaggacgccgtgtggcgaggcccgcctcccacc
aatggcgtgatgcatgtggacgagtgtatggaattccaccgcctctggagcgccatgcag
tttgtttactgcatacctgtcggcactcacgagttcaccgcagagcagtgttttggtgac
gggctgaactgggcaggctgttccatcatcgtgctgttgggtcagcagcgccgctttgac
ctgtttgacttctgctaccacctgctcaaggtgcagaggcaggacagcaaggatgagatc
atcaagaacgtgccactgaagaagatggctgaccgcatcaggaagtaccagatcctgaac
aatgagatctttgccatcctcaacaagtacatgaaggctgtggagaccgatagttccact
gtggagcatgtccgctgcttccagccacctatacaccagtccctggccacaacatgctga
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integrated database retrieval system
