Oncorhynchus nerka (sockeye salmon): 115129130
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Entry
115129130 CDS
T07952
Name
(RefSeq) N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like
KO
K00741
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase [EC:
2.4.1.149
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00533
Glycosaminoglycan biosynthesis - keratan sulfate
one00601
Glycosphingolipid biosynthesis - lacto and neolacto series
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
115129130
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
115129130
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115129130
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.149 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase
115129130
Glycosyltransferases [BR:
one01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
115129130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
115129130
NCBI-ProteinID:
XP_029515096
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All DBs
Position
LG5:2026899..2028469
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AA seq
496 aa
AA seq
DB search
MACYHWRWRRVLLCLCCTPGVLVGSLCVYVTLAVCYGTTTITGPGVAAPIPQTLPERFIA
LGLTSNGTVAPHPTSSFWDPKPHGGALWNLLQLHIDRQYNPILKPSREYNYHLDTNNNNN
KNYLRFSFPTLSAGFSEIGNLTSQMEDFPELPLQMQMFVRSMHFRDYPVLIEPAKLCGRG
PSKGQGPLLVLAIKTKDLNFENRQAIRQTWGRAGWVAGATGNGGVVRRVFLLGKNHAEPR
VDVSELLQLESRQYRDILQWDFHDSFYNLTLKDVLLWDWLSTHCPMARFIFKGDDDVLLR
TPALLDYLREQTILSGAPGSEFMKGFMVGDVIGAASPNRVNTTKYFIPASFYNGLYPPYG
GGGGVVYSGELALRLNRISRRVHLYPIDDVYVGMCLHRLGVHPIHHPAFLTFDFPKKEGE
ERCAYHTILLVHKRSPAQVMKLWSEIMRNQTECNSTILRTEKENKNTFLIDPFSVKDNKG
QELLTDPWGSSENSDL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgctaccattggcggtggcggcgtgttctcctatgcctgtgctgtactccaggt
gtcctggtgggatctctctgtgtgtacgtcaccctggctgtgtgctatggtactaccacc
atcacaggcccaggcgttgctgcccctatcccacaaactctaccagagcgcttcattgca
ctggggttaaccagtaatggcaccgtggccccccatcccaccagctccttctgggacccc
aagccccacggaggagccctctggaacctgctccagttacacattgaccgccaatacaac
cccatcctgaagcccagcagagagtacaattaccatcttgataccaataataacaataat
aaaaactatttgcggttttccttccccaccttgagtgcagggttctctgagattgggaac
ttgacgtctcaaatggaggatttcccagagctgcccctgcagatgcagatgtttgtgcgc
tccatgcacttcagggactaccctgtcctcattgagcctgctaaactgtgtgggcgtggg
ccaagtaagggacaggggcctctcctagtgctggccattaagaccaaggatctgaacttt
gagaaccgtcaagccatccggcagacatggggccgggcgggatgggtggcaggggcgaca
gggaacggcggtgtggtgcggagggtcttcctcctggggaagaaccacgcagagccccga
gtagacgtcagcgagctgctgcagctggagagccgccagtacagggacatcctccagtgg
gacttccacgactccttctataacctcaccctgaaggacgtgctgctgtgggactggctc
tccacccactgccccatggcacgcttcatctttaaaggggacgacgacgtcctgttgcgg
acccctgctctcttagactacctccgggagcagacgatcctgtcaggtgcgcctgggtca
gagtttatgaagggattcatggtaggggatgtgataggagcagccagccccaacagagtc
aacactaccaagtactttattcctgctagtttctataatggtctgtaccctccgtacggg
ggtgggggaggggtggtgtactcaggggagctggccctgaggctcaaccgtatttcccgg
agagttcacctgtaccccattgatgatgtctacgtgggcatgtgcctccacaggctcggg
gtccaccccatccaccaccccgccttcctcaccttcgacttccccaagaaagagggggaa
gagcggtgtgcgtaccacactatcttactggtacacaaacgcagccctgctcaggtgatg
aagctgtggtcggagataatgaggaaccagacagagtgcaacagcaccatcctgagaact
gagaaggagaacaagaatacatttctgatagatccatttagtgtgaaagacaacaaggga
caggaacttctgacggatccatggggtagttctgaaaattcagatctatag
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