Oncorhynchus nerka (sockeye salmon): 115129200
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Entry
115129200 CDS
T07952
Name
(RefSeq) EH domain-containing protein 1-like
KO
K12483
EH domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115129200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115129200
Membrane trafficking [BR:
one04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115129200
Exosome [BR:
one04147
]
Exosomal proteins
Proteins found in most exosomes
115129200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EH
Dynamin_N
EHD_N
MMR_HSR1
EF-hand_1
GTP_EFTU
EF-hand_7
Roc
AAA_16
EF-hand_6
AAA_22
SAS-6_N
AAA_28
Gtr1_RagA
TsaE
EF-hand_5
AIG1
Motif
Other DBs
NCBI-GeneID:
115129200
NCBI-ProteinID:
XP_029515161
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All DBs
Position
LG5:complement(2302912..2313849)
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AA seq
534 aa
AA seq
DB search
MFRSRDKKTPEQFQDVSQGLKKLYRTKLFPLEDTYQFHDFHSPSLEDADFDNKPMVLLVG
QYSTGKTTFIRHLMEQDFPGMRIGPEPTTDSFIAVMHGDQDGMIPGNALVVDPKKPFRKL
NAFGNAFLNRFMCAQMPNPVLESISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRI
ILLFDAHKLDISDEFSEVIRALKNHEDKMRVVLNKADQINTQQLMRVYGALMWSLGKIIN
TPEVVRVYIGSFWAQPLLIADNRKLFEAEEQDLFQDIQGLPRNAAIRKLNDLIKRARLAK
VHAYIIISLKKEMPSVFGKENKKKELIANLGETYLKIEREHQISPGDFPKLKKMQELLAG
HDFSKFPTMKPKLLEAVEDMLANDIARLMTLVRQEEAAMPSQAVHGGAFEGTMSGPFGHG
YGEGAGEGIDELEWVVARDKPSYDEIFYTLSPINGKVSGAAAKKEMVKSKLPNTVLGKIW
KLADVDKDGYLDDEEFALANHLIRVKLEGHELPGKLPEHLVPPSKRHQEIDMGE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcagtagggacaaaaaaacgcctgaacagttccaggatgtttcgcaagggttg
aaaaaactatatcggactaaactctttcccctggaggacacctaccaattccacgacttt
cactcaccgtcgctcgaagatgccgacttcgacaacaaacccatggttctcttggtcggt
cagtactcgaccgggaaaaccacctttattcggcacctgatggagcaggactttcccggt
atgaggatagggccagagccgacgacagactcattcatagccgtgatgcacggtgaccag
gacgggatgatacctggaaacgccttggttgtcgaccccaaaaaacccttccgcaaactc
aacgcatttggtaacgcgttcctcaacagatttatgtgtgctcagatgcccaacccagtc
ctggagagcatcagtatcatcgatacccctggaatcttgtcaggagagaaacagagaata
agcagagggtatgactttgcggcggtactggagtggtttgcggagcgtgtggaccgcatc
atcctcctgtttgacgcccacaagctggacatctcagacgagttctctgaggtgatccgc
gccctgaagaaccacgaggacaagatgcgcgtggtgctgaacaaggctgaccagatcaac
acgcagcagctgatgagggtctacggcgccctcatgtggtcgctgggaaagatcattaac
acccctgaggtggtcagggtgtacatcgggtcgttctgggcccagcctctcctgatcgct
gacaacaggaagctgtttgaggctgaggaacaggacttgttccaggacatccaggggctg
ccccggaacgcagcgatacggaaactcaacgacctcatcaaaagggcacggctggctaag
gtccatgcctacatcatcatctctctgaagaaggagatgcccagtgtgtttggaaaggag
aacaagaagaaggaactgatcgccaacctgggagagacgtacctgaagatagagagggaa
catcagatctcccctggagacttccctaaactcaagaagatgcaggagctcctggctggc
cacgacttctctaagttccctaccatgaagcccaagctactggaggctgtggaggacatg
ttggccaacgacatcgctcgcctcatgaccctggtccgtcaggaggaagccgccatgccc
agccaggctgtccacggaggtgcctttgagggcaccatgtccggccccttcggtcacggc
tacggagagggtgccggggaaggcatcgatgagctggagtgggtggtggcccgggacaaa
ccttcgtacgatgagattttctacacgctgtcgccgatcaatgggaaagtgtcaggcgcg
gcagccaagaaggagatggtgaagtccaagctgcccaacacggtcctgggtaagatctgg
aagctggccgacgtggataaggatggttacctagacgacgaagagtttgcgttggccaat
cacctgatcagagtgaagctggagggacatgagctgccgggtaaacttccggaacacctg
gtgccaccttctaaacgccaccaggagattgatatgggagagtga
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