Oncorhynchus nerka (sockeye salmon): 115129231
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Entry
115129231 CDS
T07952
Name
(RefSeq) integrator complex subunit 5-like
KO
K13142
integrator complex subunit 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115129231
Spliceosome [BR:
one03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
115129231
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Gene cluster
GFIT
Motif
Pfam:
INTS5_C
INTS5_N
Motif
Other DBs
NCBI-GeneID:
115129231
NCBI-ProteinID:
XP_029515206
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Position
LG5:complement(2350300..2354479)
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AA seq
1017 aa
AA seq
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MCAVFDGTSLTVTMQTSLTHTPQNAFSPQELSQEIKSFISGVDQTQGRKLSVREHARCAV
RLLRSVPACRGAVLEHLRGVYNEHVSAFLHNLETNGDGNGDSNLEDVITEVHGVLAEFIK
LNPRAWAPLVSTWAVDLLGQLSSKHAGRRAAPHSSSLNELLQLWMSCAATRSLMEAYTQC
LAAMIAWCPDQCVDALLDTSVQHSPHFDWVVAHIGSSFPGTIISRVLACGLKDFCSHGTA
DKCQGDKSSRVPKIGSVVGILGHLAARHSDSIRRELLRMFQESLSPPTIPPSSGSTSLEH
SAQLRRATVPFLLQLAALSPSLLGAVSTELVESLRPPVLLQLQAVLQGLPRDELDNMLGL
AVHLIAQSPAGGARILRFLADTATPASVIISGPTSSPHEGVREACDLLLQMLLLHLHKLV
YTRSEGDDGYYSRPHSPSSQAPRVVPFLEELQSHVGELCAEMLRLERKRHLWLHQLLCLL
CLLSVYGGPSVATEALCQLLTLARNPDQLALAWQLHTPLSACLPGLIPAAVIRCVAQIHT
HTLGPRQLCQLLLNLGSAMQSVQEEERKGPGGGMGGGGASPQSSMAVQVGAAVSGHLHDF
CPLLLHGDPAVSHAAVRLLSRSPLPRAALPSHLLLVCRAAVTHFFLALRRRGETGKGRDE
GQGGEAVNCSVLLLSRLVGYSPLTLKCVLQHLVEGALHKGNTDLFGGQSEDIGGDTPISP
SLAPDRVGSLLDINCRFGTTVNFSGSVWSVFHAGVIGKGLKQRSATPHPDAASVIQNVQT
LLAVTVQCCSAPSGNGGNGGGTRHQPSVPDEPPPINAEAAKMMAVTLVEYICPDVANGEL
SWPPEEHARTTVERDIHIRRCFEAHPVLFPLLHVVAAGRPALCYCSAVLRGLLATLLAHW
EASREALAMDSPWHLQASCMLVSCMGEGQLLPPVLGNVHEAFPYLTPFEVRLLLLAVWEY
VRGNGPMPQKFVFSAEKGLFCRDFSRDGDVARYVAPIHSVLHKNIDRLGHLCWRFQL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgccgtgtttgacgggacttccctgacagtcaccatgcagacctctctcactcac
acaccgcagaatgcatttagcccccaggaactgtcccaggagataaaatccttcatcagt
ggtgtggaccagacccagggtcgtaaactcagcgtccgtgagcatgcccgctgtgccgtg
cgtctactacggtctgtgcctgcctgtcgcggggcggtcctcgagcacctaaggggcgtg
tacaacgagcacgtctcagcctttcttcacaatctagagacaaacggcgatggcaacggg
gactccaacctggaggatgtcatcacggaggtccatggcgtcctggcggagttcattaag
ctcaacccccgagcctgggctccccttgtctcaacctgggctgtagacctgctggggcag
ctgagctccaagcatgctggccgcagggcagctccccactcctccagcctcaacgagctg
ctgcagctgtggatgtcctgtgcggctacacgctccctcatggaggcctatacccagtgc
ctggcagctatgatagcctggtgtcctgaccaatgtgtggacgctctcctggacacctcc
gtgcagcactccccccacttcgactgggtggtggctcacatcggatcctccttcccgggc
accatcatcagccgtgtcctggcctgtggccttaaagacttctgctcccacgggacggct
gacaagtgtcagggagacaagagcagccgagtgcctaagatcggctctgtggtggggatc
ctaggccacctggcggcgcggcactctgacagcatccggcgggagctgctgaggatgttc
caggagagcctcagtcccccgactataccccccagctctgggtccacctccttggagcac
tcagcccagctccgcagagccacagtgcccttccttctccagctggcggcgctgtctcct
tctcttctgggcgccgtatctacagagctggtggagtctctacggcctccagtcttgctc
cagctccaggctgttctacagggccttcccagggacgagcttgacaacatgctggggctg
gctgtccacctcatcgcccagagccctgctggaggggcacgcatcctccgcttcctagct
gacacggccacccccgcctctgtcatcatctccggccctacgtcttcccctcacgagggg
gtccgggaggcctgcgacctcctcctccagatgctcctgctgcacctccacaagctggtc
tacacccgctcagaaggggatgatggctactacagccgcccccactctccctcctcccag
gcgccccgtgtggtccccttcctagaggagctgcagtcccacgtgggagagctctgtgct
gagatgctgagactggagaggaagcgtcatctctggctgcaccagctgctgtgtctgctg
tgtctgttgtctgtatacgggggccctagcgtggccacggaggccctctgtcagctgctc
accctggcccggaacccagaccagctggccctggcctggcagcttcacaccccactgtcc
gcctgcctgccgggcctcatccctgccgcagtgatccgctgcgtggcccagatccataca
cacaccctgggacccaggcagctctgccagctccttctcaacctgggctctgccatgcag
agtgtacaggaggaggagaggaagggcccaggaggaggcatgggaggaggaggtgctagt
cctcagtcctccatggcagtgcaggttggagcagcggtctcaggacacctccatgacttc
tgtcctctgctcctccacggtgacccggcggtatcccacgctgctgtgcggctcctgtcc
cgcagccccctcccccgtgctgccctgccttcccacctgttgcttgtttgtcgggctgcc
gtcacacacttctttctggcactgcggaggagaggagagacagggaaggggagagacgaa
ggccagggaggagaggcggtgaactgttcggtgctcctcctgtcccgtctggtaggttac
tcccctctaaccctcaaatgtgtcctgcagcacctggtggagggagctctacataaagga
aacactgacttgttcggagggcagagtgaggacattggaggggacacccccatctccccg
tccctggcccctgaccgggtgggctccctgctggacatcaactgcaggttcggcaccacg
gtcaacttctctggcagtgtgtggtctgtgttccatgctggggtgatagggaagggtctg
aagcagcgcagcgctacgcctcaccccgacgctgccagtgtcatacagaatgtccagact
ctgctggctgtcaccgtccagtgctgcagtgcaccatccgggaatggcggcaacggtgga
ggcacccgacaccagccctccgttccagatgagccgccgcccatcaacgctgaggcggcc
aaaatgatggcagtgacgctagtggagtatatctgccccgacgtggccaacggggaactg
tcatggccgccagaggaacacgcccgcacaactgtagagcgtgacatacacatccgccgc
tgcttcgaggcccaccctgtcctcttccctttactccatgttgttgctgccgggcgtcct
gctctctgttactgttctgcggtgctccggggcctgctggccactctgctggcccactgg
gaggcttcgagggaggctttggcgatggactccccgtggcacctccaggcctcatgcatg
ctggtgtcctgtatgggtgagggccagctgctgccccctgtgctgggcaacgtccacgag
gctttcccctacctgacgccgttcgaagtgaggcttctcctcctggctgtgtgggaatat
gtaaggggtaacggccccatgccacagaagtttgtcttcagtgccgagaagggcctgttc
tgccgggatttctcgcgggacggagacgtggcgagatacgtagcacccattcacagtgtc
ctgcataagaacattgaccggctggggcatctatgctggcgtttccagctctga
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