Oncorhynchus nerka (sockeye salmon): 115129239
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Entry
115129239 CDS
T07952
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115129239
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
URGCP_GTPase
Motif
Other DBs
NCBI-GeneID:
115129239
NCBI-ProteinID:
XP_029515227
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Position
LG1:29455222..29465999
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AA seq
626 aa
AA seq
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MAGQTVSMKEPVCLIENDSDGKLCVVRSALDILDQIDQHVVVVSVVGLYRTGKSYLMNKL
AGEKKGFALGATIQSKTKGIWMWCVPHPEKRDHTLVLLDTEGLGDVEKGDEKNDNWIFSL
AVLLSSTLVYNSMGTIDNNALEKLHYVTELTEHIKVKSNQRDGEESSEYLRYFPSFVWTV
RDFTLTLEVDGRPITANEYLENALKLRTGHSQKDQAYNLPRSCLRNYFSPRWCFVFERPA
SGDKMRRMEELTDADLEPAFVEQAKEFCDHVFNDAKTKTLKQGLKVSGRLLGNLAETYVS
AIRSGQIPCLDNAVLALAQIENSGAIERARAHYQKGMADWVAYPTETQEELSEVHAVMEK
EAVAIFINNSFKDEDQKYQLELMKVLQEAYDKICERNYKESQKSCESKIQCIFAPLEEKI
RDGSYMTPGGYKEYCNDLKLATSEYRSEGGRGVKAEEVLKEYLGRKASIGEAILSADQSL
TEAEQRAEAEQAKREASERENRAMEEQLVVQERLRADQQRTYEENVNQLMERMERDSRNA
IAEHDRVLQARLKEQNDLVRQGFDDRAHQMQREIDALKGAKAQEEEKKPSFMSTALDTIG
TAAASFLPGIIPKVGGMVVKWLSKLF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccagacagtatccatgaaggaaccagtatgtctgatagagaacgacagtgat
gggaagctgtgtgtggtccgcagtgcactggacatcctggaccagattgaccagcatgtg
gtagtggtgtcggtggtcgggctgtaccgcaccggcaagtcctacctcatgaacaagctg
gctggcgagaaaaaaggttttgccctgggagccaccatccagtccaaaactaagggcatc
tggatgtggtgtgtgcctcaccctgaaaaaagagaccacaccctggtgctgctggataca
gaggggctgggggatgtggagaagggtgatgagaagaatgacaactggatcttttccctg
gctgtcctgctcagcagtactctggtgtacaacagcatgggaaccatcgacaacaacgcc
ctggagaaactacactatgtgacagaactgacagagcacatcaaggtgaagtccaaccag
cgagacggggaggaatcttcagagtacctgcgttactttccttcctttgtgtggacagtc
agagatttcaccctgaccctggaggttgatgggagacccatcacagccaatgagtacctg
gagaacgctcttaaactgagaacaggtcatagtcagaaagatcaggcatacaatctgcct
cgtagctgcctgcggaactatttctctcctcgctggtgctttgtgtttgagaggccagcc
agcggagacaaaatgagacgtatggaggagctgaccgacgctgacctggagcctgccttt
gtggagcaagccaaggagttctgtgaccacgtcttcaatgacgccaagaccaagaccctg
aaacagggcctgaaagttagcggcagactgctgggaaacctggcagagacgtatgtgtct
gccatccggagtgggcagatcccctgcctggacaatgctgtgttggcgctggcccaaatt
gagaactccggtgccatcgagagggccagggcccactaccagaagggcatggctgactgg
gtggcctaccccacagagacccaagaggagctgtctgaagtgcatgctgtcatggagaag
gaggctgtggccatattcatcaacaactccttcaaagacgaggaccagaagtaccagttg
gagcttatgaaagtgcttcaagaagcgtacgataagatctgtgagaggaactacaaggag
tcccagaagtcatgcgagtccaaaatccaatgcatctttgcccccctggaggagaaaata
agggatggctcctacatgacccctggaggatacaaagagtactgcaacgacctgaaactg
gccaccagtgaatacagatctgagggaggcagaggagtgaaggctgaagaggtactgaag
gagtacttgggaaggaaggccagcattggtgaggccatcctgtcagcagaccagtccctc
actgaagctgagcagagagcagaagcggagcaagcaaaaagggaggcatctgagcgggag
aatcgagccatggaggagcagctggttgtccaggagaggttgagagcggaccagcagagg
acgtatgaggagaatgtgaaccagctgatggagaggatggagagagacagtagaaatgcc
atagcagagcacgatagagttctacaggccagactcaaggagcagaatgaccttgtccgg
caagggtttgatgacagagcacaccaaatgcaaagagagatagatgcccttaagggtgcg
aaggcacaagaggaagagaaaaaaccctcatttatgagcacagctctggatactattggg
actgcagctgcctcgttccttccaggaataattcccaaagtaggaggaatggttgtgaaa
tggctgtctaagttgttctga
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