Oncorhynchus nerka (sockeye salmon): 115129240
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Entry
115129240 CDS
T07952
Symbol
ints6l
Name
(RefSeq) integrator complex subunit 6-like isoform X1
KO
K13143
integrator complex subunit 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115129240 (ints6l)
Spliceosome [BR:
one03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
115129240 (ints6l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_INTS6
INT_SG_DDX_CT_C
VWA_2
VWA_4
VWA
Motif
Other DBs
NCBI-GeneID:
115129240
NCBI-ProteinID:
XP_029515224
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All DBs
Position
LG5:2742746..2768172
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AA seq
910 aa
AA seq
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MPILLFLIDTSASMNQRTYLGTTYLDIAKGAVEIFMKLRARDPASRGDRYMLVTFDDPPY
GVKAGWKENHATFMSELKNLQASGLTTLGHALRAAFDLLNLNRLVSGIDNYGQGRNPFFL
EPSVIITITDGNKLTHTSGVPDELHLPLTSPLPGSELTKEPFRWDQRLFALVLRLPGAAT
PDSEQLGSVPNDESAITQMCEVTGGRSYCVRTQRMLNQCLDSLVQKVLSGVVINFEKTGP
DPPLVGEDGMVDPSRAVLSFSPQPWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSP
ALPPRSAHPMVRFTCVDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHMCWQVFVNSSG
KHSDLAQPFGYLKASTTLSCVNLFVMPYNYPVVLPLLDDLFKVHKLKPNLKWRQAFEIYL
KTMPPYFLLPLKKALRMMGAPNLISDNMDCGLSYSVISYLKKLSQQAKMESDRLIVSVGK
KAPQETGIKVKNHSNTLSLAHRKDFKQLLQGITGEMSLRLADINFKEFAGFQIALLNKDL
KPQAYRNAYDIPRRNLLDQLTRMRSNLLRTTQKLIRGQDEDYLHSIPMVQMGNYQEYLKM
MPSPLREIDPDQPKRLHTFGNPFKQDKKGMMIDEADEFVTGPQSKKRGVTGDPNSGAALK
RRRSMSPLLRRPQTPPIITNHVVGKGSNGNGVPGQPGIKPIPLHKGRGAEGNSMLGTENN
REGGVGPESGDGWPGVVVDGVDGVCTNALILEERESERPGMCAGDSGEDSGVEEDRLGEG
GLDERPPSERQQQSCEGDQEGELEGDENGADQAEPEAVTIAPLDGSNAELRTRVIKEVRK
PGRNYETIFRLLEEVKGSVTIQRYFIHHAIKEDARFKKRVLIQQLETALELIEEKELQLP
AVRLNNDHGR
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgcctattttacttttcctgatagacacgtccgcttctatgaatcagcgcacttatttg
ggtacgacgtatctggacattgctaaaggcgcggttgagatctttatgaagctgcgtgcc
cgagacccggctagtagaggcgacaggtacatgctagttacattcgatgatccaccatac
ggagttaaggcgggctggaaggagaaccatgccacgtttatgagtgaactgaagaatctg
caggcgtctggactgacaactctgggtcacgctctccgcgcagcctttgacctactcaac
ctaaaccgccttgtctctggcatcgacaactatggacagggccgtaacccgttctttctg
gagccttcggtgatcatcaccatcacggatgggaacaagctgactcacacctctggggtg
ccggatgagcttcacctgcccctgacctctccactgccaggcagtgagctgaccaaggag
ccattccggtgggaccagcggctcttcgccctggtgctgcgtctccctggggcagccacg
cccgacagcgagcagctgggcagcgtccccaacgacgagtctgccatcacccagatgtgt
gaggtcactggaggtcggtcatactgtgtacggactcagaggatgctgaaccagtgtctg
gactctctggtccagaaggttctgagtggtgtcgtcattaactttgaaaagacagggcca
gatccgcctctggtaggcgaagatggtatggttgacccgagccgggccgtgttgtccttc
agcccacagccctggcacagctgccacaagctcatctacgtgcgacccaaccccaagaca
ggggtgcctgtaggccactggccgatccccgagtccttctggccggaccagaactccccc
gctctgcctcctcgctctgcccaccccatggtgcgtttcacctgtgtggactgtgagccc
atggtgattgacaagctgccctttgacaagtacgaactggagccctcgccactcacccag
tatatcctggagaggaagtccccacacatgtgctggcaggtctttgtgaacagtagtgga
aagcacagtgacctagcccagccctttggctacctgaaggccagcaccactctctcctgt
gtcaacctcttcgtcatgccttacaactacccagttgttttgccactccttgatgacctg
tttaaagtgcacaaactgaagccaaacctaaagtggcggcaggcctttgagatctacctg
aagaccatgcctccttactttctcttgccattgaagaaggcactgcgcatgatgggagcg
cccaacctcatctccgacaacatggactgtggcctcagctacagtgtcatctcctaccta
aagaagcttagccagcaggcaaagatggagtcagatcgcctgatcgtgtctgtagggaag
aaggctccccaagagactgggataaaggtgaagaaccactccaacactctgtccctggcc
caccgcaaagacttcaagcagctgctgcagggtatcactggagagatgtccctccgcctt
gcagacatcaacttcaaggagtttgccggctttcagattgcactgctcaacaaggatcta
aagcctcaggcgtatcgaaacgcctatgacatcccaaggaggaaccttctggatcagctg
acacggatgcgctccaaccttctgaggactactcagaaacttatcagaggacaagatgaa
gactaccttcacagtatacccatggttcagatgggcaactatcaggagtatctaaagatg
atgccctctcctctgagagagatcgaccctgaccaacccaaacgcctgcacaccttcggc
aacccattcaaacaggacaagaaggggatgatgattgatgaggcagatgagtttgtaacg
ggtccccaaagcaagaagagaggcgttactggggaccccaactcgggggctgctctgaag
agaaggcggagcatgtcccctttactgcgtcggccccagactccaccaatcatcaccaac
catgtagtggggaaggggtccaatgggaacggggtcccgggacagcctggcatcaagccc
atcccactgcacaaaggtaggggagcagaggggaacagcatgctgggcacagagaataac
agggaggggggtgtggggcctgaatcaggggacggctggcctggagtggtggtggacggt
gtggacggtgtgtgcacaaatgcactcatcctggaggagagagagagtgagaggcctggg
atgtgtgcgggggacagtggggaggacagtggcgtggaggaggacaggttaggggagggt
ggcctggatgagcggcccccctcagagagacagcagcaaagctgtgagggggaccaggag
ggagagctggagggagatgaaaatggagcagaccaagctgagcctgaggcggtcaccata
gccccactagatggcagcaatgctgagctgcgcacgcgggtcatcaaggaggtccgcaaa
cctggccgcaactatgagaccatattcaggctgctggaggaggtgaaggggtctgtgacg
atccagaggtacttcatccatcacgcgatcaaggaggatgccaggtttaagaagcgggtg
ctgatccagcagttggagacagctctggagttgattgaggagaaggagctgcagctccct
gctgtccgcctcaacaacgaccatggtagatag
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