Oncorhynchus nerka (sockeye salmon): 115129266
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Entry
115129266 CDS
T07952
Symbol
rnf103
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115129266 (rnf103)
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115129266 (rnf103)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115129266 (rnf103)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
Thioredoxin_6
A6-like_Thioredoxin-like_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115129266
NCBI-ProteinID:
XP_029515289
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All DBs
Position
LG5:3674434..3679143
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AA seq
666 aa
AA seq
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MWLKLFFLLLYFMVLFVLARFFEAVVWYETGLFATQLVDPVTLSFNKLKTILECRGLGYS
GLAEKRDVRELVEKSGDLMQGELYSAIKNEKEQAESSTTFSGEMHFYELVEDTKDGIWLV
QVIAQDRDALLSKANWGKMVQKVSQFGIRTGTFNCSSDSRYCRKRGWMKSTLIMSVPQTY
ASKGKVMLKEYNGRRIETEHIFKWMTAHVASRIKTIRMSQQLVEEWHPSEKHPVKMFLFA
KLAQPPAFFSALSVKFTGRIEFIFVDVQSWDNITSLEEIGVQQLPSYILKMPEGIYRYGN
SIGEFISLQAMDTFLRSVQPEVNDLFVLSLVMVNLMAWLDLFITQGATIKRFVVLISTLG
TYNSLLIISWLPILGFLQLPYLEGFYDYSLKLLRYADTTTIASWVRTDWTFYSSHPALFL
STYLAHGLLIDYFEKKRRCNNEEENPNNLEWLSSLWDWYTSYLVHPITSFHNFPNESDWD
DDPNFLLERLAFPDLWLHPLIPIDYINNLPTWRFKCTQVCGPNSEENSGRDLDSNIQNTT
GGQTQGLNSEHEEHGCGKERACAADSCCHSENGGDVPCMKREAQEQQADWSHWPSDMIHC
TECVVCLENFETDCIVMGLPCAHVFHQQCIVVWLAGGQHCCPVCRGPSYKRKPVRSSGLD
LLEQQE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaaaactattttttctcctactgtattttatggtgttattcgttttagccaga
ttttttgaagcagttgtctggtatgaaactggtctttttgccacccagttggttgatcct
gtaaccctgagtttcaataagttaaagaccattctagaatgtcgaggactgggatactct
gggcttgcagagaagagggatgtcagagaactagtcgaaaagtcaggtgacctgatgcaa
ggggagttgtactctgccatcaaaaatgaaaaggagcaagctgagtccagcactaccttc
agtggggagatgcacttttatgagctggtggaggacaccaaagatggcatttggttggtc
caggtaattgcccaagaccgagatgctcttttgagcaaagccaactggggtaaaatggtc
caaaaggtttctcagtttggcattcgcactggtacttttaactgctccagtgactcaagg
tattgtcgtaaacggggttggatgaaatccacacttataatgtctgtgcctcagacttat
gcttcaaaaggaaaggttatgctgaaagagtacaatggcagacgcattgagaccgagcac
atcttcaagtggatgacggcacacgtagcgtcccgtataaaaaccatccgcatgtctcag
cagcttgttgaagagtggcaccccagtgagaagcacccagtaaagatgttcctatttgcc
aagctggcacaacctccagcctttttttcagcactcagtgtcaagttcacaggtcggatc
gagttcatctttgtagatgtgcagagctgggacaatataacctccttggaagagataggt
gtgcaacagttgccatcgtacatcctgaaaatgccggagggcatctacagatatgggaac
agcattggagagttcatctccctacaggccatggacactttcctccgttctgttcagcca
gaggtcaatgacctgtttgtgttgagtctagtgatggtcaacctcatggcctggttggac
ctgttcataacacagggcgccaccatcaagcgcttcgtggttctcatcagtacgctgggg
acctacaactccctgctcatcatctcctggctgcctatcctggggttcctacagttgcca
tatctggagggcttctacgactacagcctcaagctgttgcgttacgcagacaccaccacc
atcgcctcctgggtgaggaccgactggaccttctactcctcccaccccgccctgttcctc
agcacctacctggcacacgggcttctcatcgactactttgagaagaagaggagatgcaac
aatgaagaagagaaccccaataacttggagtggctgtccagcctctgggattggtacacc
agctacttggtccatcccataacctcatttcataacttccccaatgagtctgactgggac
gatgaccccaatttccttctggagaggttggcctttcccgatctctggcttcacccgctt
atccccattgactacatcaacaacctgcccacctggaggttcaagtgcacacaggtctgt
gggccaaactctgaagagaacagcggcagagatctggacagcaacatacaaaacactaca
ggaggacagacccaaggcttaaacagtgagcatgaagaacatggctgtggtaaagagaga
gcttgtgccgctgattcatgttgtcattctgaaaatggaggggatgtaccatgcatgaaa
agggaagcacaagagcaacaagcggattggtcccattggcccagtgacatgatacactgc
acagagtgtgttgtgtgtctggagaactttgagactgattgcattgtcatgggactgccc
tgtgcccacgtgttccaccagcagtgcattgtggtctggctggcaggtggacagcactgt
tgcccggtgtgcagggggccatcctacaagaggaagccagttagatcatctggtctggac
ctactggagcagcaggaatag
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