Oncorhynchus nerka (sockeye salmon): 115129287
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Entry
115129287 CDS
T07952
Name
(RefSeq) synaptic functional regulator FMR1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115129287
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115129287
Factors involved in mRNA localization
Other mRNA localization factors
115129287
mRNA cycle factors
Stress granule specific factors
115129287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
DUF7636
Motif
Other DBs
NCBI-GeneID:
115129287
NCBI-ProteinID:
XP_029515323
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Position
LG5:complement(5295168..5304139)
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AA seq
581 aa
AA seq
DB search
MDELAVEVRGTSGAFYKGYLKDVNESSVTVSFENNWQPERQIPFHDVRFPPPTGFQKEIN
ESDEVEVCAVYSRANDKEPCGWWLATVRMVKGEFYVIEYTACDATLNEIVTLERLRPVNP
NKPATKNSFLKINLDVPEDLRQMCLKDSHKDFKKALGAFNVTYDSDKKQLVILSVNEVTT
KRVQMLSDMHFRSLRTKLSLMQRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHG
ANIQQARKVPGVTTIDLDEETCTFHIYGEDQEAVRKARSFLEFSEDVIKVPRNLVGKVIG
KNGKLIQEVVDKSGVVRVRIEAENNKKPPPLDEGMVPFVFVGTKESISNAKVLLDYHLNY
LKEVDQLRMERLQIDEQLRQIGGGGPRGGPGPGRPDKTIVDNGGLGMMGMGSQRGGKPFV
RGGGRGRRGGPSLASGTNSEASNASETESDHKDELSDWSLAPTEDLTGGFPKRPDTRKRG
GPRGRGGRGRGGGFKVAEDIQWTESRSRNTRDPKLRPLEDSLQIRVDGNNERSVHAAARG
PAGDGANRQRPVKERPIKKDNQESPGGEATAISLAMVNGVS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctagcggttgaagtcagggggacgagtggggctttttacaagggctatttg
aaggatgttaatgaaagttctgtcactgtctcctttgaaaacaattggcagccagagcgt
caaatccccttccatgatgttcgatttcctccacccacaggttttcagaaagagataaac
gagagtgatgaagttgaggtatgtgctgtttattctagggccaatgacaaagaaccatgt
ggctggtggctggcgacagttcgaatggtgaagggtgagttttatgtcatagagtatacc
gcttgtgatgccacgctaaatgaaatagttacattagagaggttacgacctgtgaatcca
aacaagccagctacaaaaaactccttcctgaaaattaatctggatgtcccagaggacttg
cggcaaatgtgtttaaaagactctcataaagattttaagaaggctttgggagcattcaat
gtcacttatgactcagacaaaaagcagcttgttattctgtccgtgaatgaggttacaacc
aaaagggtgcagatgctgagcgacatgcatttccggagcctgcgcaccaagctgtcccta
atgcagaggaatgaggaggctagccgccaactggagagctctcggcagctggcgtccagg
ttccatgaacagtttgtggtccgggatgatctgatggggctggccattgggacccacggt
gccaacatccagcaggccaggaaagtacctggggtcaccactatagacctggatgaagag
acctgcaccttccacatctatggagaggaccaagaggctgtccgcaaggctaggagcttc
ttggagttttctgaagatgtcatcaaagtaccaaggaatttagtggggaaagtcattggg
aaaaatggaaagctgatccaggaagtggtggataaatcaggtgttgttcgtgttcggatt
gaggcagagaacaacaagaagccacctccattggacgagggcatggtgccatttgtcttt
gtggggacaaaggagagcatctccaatgctaaagtactgttggactatcatctcaactat
ctgaaggaagtggaccagctccgtatggagcgactgcagatagatgagcagctgaggcag
attgggggagggggccccagggggggcccagggcctggacggcctgacaagaccatcgta
gacaacggtggcctggggatgatgggcatgggctcccagagaggagggaagccattcgtc
aggggaggaggccgtggccgacgtggtggtccctctttagcctcaggcactaactctgag
gcttccaatgcctccgagactgagtcggaccacaaggacgagctgagtgactggtctctg
gcccccactgaggacctgactgggggcttccccaaacgacctgatacacgcaagagagga
gggcctcgcgggcggggagggagaggaagagggggaggcttcaaagtagctgaagacatc
cagtggactgagtcacgctcacggaataccagagaccctaagctgaggcctctggaagat
tctttgcagatcagagtggacggtaataatgagaggagtgttcatgctgcagccagaggc
cccgcaggcgatggcgccaaccgacagagacccgtaaaagagcgacctatcaagaaggat
aaccaggaaagccctggtggtgaagccaccgccataagcctggcgatggtgaacggggtg
tcgtag
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