Oncorhynchus nerka (sockeye salmon): 115129292
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Entry
115129292 CDS
T07952
Name
(RefSeq) uncharacterized protein LOC115129292 isoform X1
KO
K26434
leucine-rich repeat flightless-interacting protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115129292
Transcription factors [BR:
one03000
]
Eukaryotic type
Other transcription factors
LRRFIP
115129292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRRFIP
Motif
Other DBs
NCBI-GeneID:
115129292
NCBI-ProteinID:
XP_029515384
LinkDB
All DBs
Position
LG1:complement(1751478..1836025)
Genome browser
AA seq
1786 aa
AA seq
DB search
MGTQGTGRKRNPNKDRSTAEDDALNLISREAEARLAAKRAARAEAREIRMKELERQQKEI
YQVQKKYYGLDNKSDKVDSEWGHIEQWMEDSERYSRPTQRHTSISDDDERMSVGSRGSVR
SDLDAIGAYGRGEKDKKSKKKKKHKDKRKDRDSNGYDNEYSAISSRSSRLGDESTSRVSR
SSRLDLQPSSGLSDESISKVSRSSRLDLQPASYASSDLNSNNGLSSSRQRLSSYESSGLL
SQISYRRHHRGSLYEDSLYSGSRRVTGSSSRHSEYNSYRGSGSRASSRASSARASPVDND
CNSVASFLRSAATSSGLPRDLDHMTIPNLSDVEDRDYLEKGSRAASTLSAATLASLGGSS
SRGESGETSITGDTETSIREIKEIHELKDQIQDVESKYMQSLKEVKDTLVEVEEKYRKAM
VSNAQLDNEKNNLMYQVDTLKDSLMELEELLSESRREYEGKSKDFEREKHAHGVLQFQFK
EMKETLKQSEELLTEIRQMRLKQDGFVREISDLQETVEWKDKKIGALERQKEYSDAIRNE
RDELRDEVVQLKDILKKHGIVLRPDLTANGEMLELGTEGSASGDPASQLAQDSQTSPMEG
GNSMLGRAQETELGSRGDKVVDPGRSRQQEDTHEEEAQENHLTSPTPCSLVGVSETETSR
EAQPFSPTLGEEVEIEGSDVNKDSDNGRPVVEVKSGPACDSEVLVVVTGPEEEVTVAGEG
CEAAGVEGTGQGRVEVASEGEMGIKNDKADEAETKVVKSSDDTKETTSEYGAAAEQEKNE
SSKEVKCLDSYPLPRETIEDTMKNGTQISQGTDLDTSKSPIKSNPEPQKTKKAEALPEIT
DLQPQAQAGNKKKKGKKKKGETQSDVKQEDRKKSTPETCVVSMTNGTQISLGTDLDTPKT
PVESNPEPQPEPQKTKKACVLPETTDMQPQPQGGKKKKKGKKKGEKQGDETQGDKMSTTE
EDVVSTPSDKEPVEAVGEGVITIETQREEGTSSSPDRELQSPEQKAQTIAEGLNLKEEQL
EEGRVEPTIEVSLTDQAKSEEVVSKKKKKKMKKDKHKPTMELEKSEGEISVLSLESNIGI
ADPVDHSKCITSAYNPMEELESTTDTSTQKDESGYTTNHDNFGDCLNSSADPKCPLDSKQ
STAGNSNNVKEEDAIKVSVEEEQTIQDSKEQGNNFHSPIVLRPELKEGVEPEDLIFHDGV
ATHPDQANENATQDLKEAGQDKPNGSPEERTNALEHEDTSMAMPENVEKCNNSADEKCCS
ISRDRNCPAAETIKLPEQLVDLPGCPVTDRHLYENNKPETLDGEEASIGGISTETELNDT
ETLDAEEASNGGISTETELNDAEEASNGGISTETELNDAEEASNGGISTETELNDAEEAS
NGGISTETELNDTETLDAEEASNGGISTETELNDAEEASNGGISTETELNDAEEASNGGI
STETELNDAEEASNGGISTETELNDAEEASNGGISTETELNDAEEASNGGISTETELNDA
EEASNGGISTETELNDTETRLQDPVKETPVTIDSFREQSHNESGPCTMVAKAEEQGDPIE
AKLEGNKVPGPSEQWNDKEHENEGQSFDFSDLVSVVPANIFPIASQEEVSQEMRTISVGY
KIEVELGKGKGNQEEEDDKPQDTEGVSTIVAQQSIEGGSDNAPEELRSPEEKAQTIVEAQ
NVNGEQQLITLEEGVSVTYNQKYIAEEGGSVTVEQQGVGESERQQNATEVDALPVEEGEE
AIQYGSQQGRRESSQSAEGNNEQSRTGLKKSSKKVKGKGKEDCRMS
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggggactcagggcaccggacgaaaaagaaatcccaataaggacaggtcgacggccgag
gatgatgcccttaatctcatatcaagagaggcagaggccaggctggcagcaaagagggcg
gccagggcagaggcccgagaaatccgtatgaaggagctggagagacaacagaaagagata
tatcaggttcagaagaaatattacggcttggacaacaaatcagacaaagtagacagcgaa
tggggacacatcgagcaatggatggaggacagtgagaggtactcacgccccacacagaga
catacttcgatctcagacgatgatgagcggatgtctgtgggcagccgaggcagtgtgagg
tcggatcttgatgcaataggggcctacggaagaggggagaaggacaagaagtccaagaaa
aagaagaaacacaaagacaaacgcaaagatcgtgacagcaacggctatgacaatgagtac
agtgctatatccagtcggagctccagactcggtgatgagagcactagcagggtctctcgc
tcgtccagactagatctgcagccgagctcaggactcagtgatgagagcattagcaaggtc
tctcgctcctccagactggacctgcagccggcatcctatgcttcctctgaccttaacagc
aacaatggtctgtcctcttctaggcaacggctttcttcctacgagtcatccgggctactc
agtcagatctcctaccggcgccatcacaggggctctttgtatgaggacagtctgtacagt
ggatctcgacgggtgaccggctcaagctctcgtcattcagagtacaatagttatcgcggc
agcggttccagggcgtcctccagggccagctcagcccgtgccagcccagtggataatgac
tgcaactctgtggccagcttcctgcgcagcgcggccaccagcagtggcctgcccagagac
ctggatcacatgaccatccccaatttatcagacgtggaggaccgagattacctggaaaag
ggatctcgagccgcttccaccctatcggcagccaccctcgcctcgctgggcgggtcttcc
tcccggggagaaagtggtgaaacgtccatcactggcgacacagaaacctccatacgagag
atcaaggagattcatgagctgaaggatcagatccaagatgtggagtcaaagtacatgcag
agcctcaaagaagtcaaggataccttagtggaggtggaggagaagtaccgcaaggccatg
gtgtccaatgcccagttggacaacgagaagaacaacctgatgtaccaggtggacacgctg
aaggactcgctcatggagctggaggagctgctgtccgagtcacgccgcgagtacgaaggg
aagagcaaggactttgagcgtgagaaacatgcccatggcgtgctgcagttccagttcaag
gagatgaaggagacactaaaacagagcgaggagttactaacagagatccgtcagatgcgt
ctcaagcaggacggctttgttagggaaatctctgacctgcaggaaaccgtggagtggaag
gataaaaagattggggccttagagcggcaaaaggagtattcggatgccatccgaaatgag
cgggatgagctcagggatgaggtggtccagctgaaagacattctgaagaaacatggaatt
gtcctcagacctgacctgactgccaatggggaaatgctggagttgggaactgaagggtca
gccagtggagatccagcttctcaattggctcaggactcccagacgtcgcccatggaaggg
gggaacagcatgcttggcagagctcaggagacggagttgggaagtagaggagataaggtg
gtggatcccggaaggtccaggcagcaagaggatacacacgaggaggaggctcaagagaac
catctgacctcgcccaccccctgtagccttgttggtgtttctgaaacagaaacatcaagg
gaggctcagccattctcacccacattgggggaagaggttgaaattgaaggcagtgatgtc
aacaaagactctgacaatggcagaccagtagtagaggtcaaaagtggaccggcctgtgat
tctgaggtacttgtggttgtaacaggtcctgaggaagaggttacagtagcgggggagggg
tgtgaagcagcaggtgtagaggggacagggcaaggcagagtagaggttgcaagcgaaggg
gaaatgggaatcaaaaatgacaaggcagatgaggcagagaccaaagttgtcaagagcagt
gacgacaccaaagagactacctcagaatatggtgcagcagctgaacaagagaaaaacgaa
tcgagtaaagaagtgaaatgtttagactcatatcctctgcctagggaaaccattgaggac
acgatgaaaaatggcacacagattagccaagggacagaccttgatactagtaagagccca
atcaaatcaaaccctgagcctcagaaaacaaaaaaggctgaagcgttaccagagataact
gacctgcagccacaggcccaagcaggcaacaagaagaagaaaggcaagaagaagaaggga
gagacacaaagcgatgtaaagcaggaagaccgtaagaagagcacaccagaaacgtgtgta
gtctccatgacaaatggcacacagattagcctagggacagaccttgatactcctaagacc
ccagtcgaatcaaaccctgagcctcaacctgagcctcagaaaacaaaaaaggcatgtgtg
ttgccagagaccactgacatgcagccacagccccaaggaggcaaaaagaaaaagaaaggc
aagaagaagggtgagaaacaaggtgatgaaacgcagggagataagatgagcacaacagaa
gaggatgtggtctccaccccaagcgataaggagccagtagaggcggtaggagagggggtt
atcacaatagagacacagcgagaggaggggaccagtagttcaccagatcgagagctccaa
agccctgaacaaaaagcacaaaccatagctgagggactgaacctgaaggaagaacaacta
gaagaaggccgagtagagcctaccattgaagtatctctgactgaccaagctaagagtgag
gaagttgtctcaaagaagaaaaagaagaaaatgaaaaaggacaaacacaaacctacaatg
gaattagagaaatcagaaggcgagatatcagtattatcccttgagtccaacattggtatt
gctgatcctgttgatcactccaagtgtataaccagcgcttataaccctatggaggaatta
gaatcgacaacagatactagtacccaaaaggatgagtcagggtacacaaccaaccatgat
aactttggagactgtttgaactcttcagctgacccaaaatgtccattggactcgaaacag
tccacagctgggaattcaaacaatgtcaaagaggaagatgcaatcaaggtctcagttgaa
gaggaacaaacaatccaagactcaaaggaacaggggaataactttcacagtcccatcgtc
ctaagaccagagctcaaggagggcgtggaacctgaagaccttatcttccatgatggtgtc
gctactcacccagaccaggctaacgaaaatgcaacacaagacctaaaagaggcaggtcaa
gataaaccaaatgggagcccagaagagcgtacaaatgcacttgaacatgaagacacttca
atggcaatgccagaaaatgtagagaaatgcaacaattcagcagatgagaaatgttgtagc
atatcgcgtgaccgcaactgccctgctgctgagaccataaaactgcctgaacaattggtg
gatctacctggttgtccagtcactgacaggcacttgtatgaaaacaacaagccagaaaca
cttgatggagaagaggcatcaattggagggatctctacagagaccgagctgaatgataca
gaaacacttgatgcagaagaggcatcaaatggagggatctctacagagaccgagctgaat
gatgcagaagaggcatcaaatggagggatctctacagagaccgagctgaatgatgcagaa
gaggcatcaaatggagggatctctacagagaccgagctgaatgatgcagaagaggcatca
aatggagggatctctacagagaccgagctgaatgatacagaaacacttgatgcagaagag
gcatcaaatggagggatctctacagagaccgagctgaatgatgcagaagaggcatcaaat
ggagggatctctacagagaccgagctgaatgatgcagaagaggcatcaaatggagggatc
tctacagagaccgagctgaatgatgcagaagaggcatcaaatggagggatctctacagag
accgagctgaatgatgcagaagaggcatcaaatggagggatctctacagagaccgagctg
aatgatgcagaagaggcatcaaatggagggatctctacagagaccgagctgaatgatgca
gaagaggcatcaaatggagggatctctacagagaccgagctgaatgatacagaaacacga
ctacaggaccctgtaaaagaaactccggtgacaattgactcttttagggaacagagccac
aatgaaagtggaccatgcactatggtggctaaagcagaagagcaaggtgatcccattgag
gccaagctggagggtaacaaggtacctggacccagtgagcagtggaatgacaaggagcat
gaaaatgagggtcaatcgtttgacttttctgacctagtttcagtggttcctgcaaatata
ttcccaatagcatcccaagaggaggtcagccaggaaatgagaacgatatcggtaggatac
aaaatagaggtagagcttggtaaagggaagggtaaccaggaagaggaggatgacaaaccg
caggacacagagggagttagcacgatagtggcacagcaatcaattgaaggggggtcggat
aatgcaccagaggagctccgaagccctgaagaaaaagcacaaaccatagttgaggcccag
aacgtgaatggagaacaacaactaatcacattagaggagggggttagtgtaacatacaac
cagaaatacattgcagaggagggagggagtgtgactgttgaacagcaaggtgtaggggag
agcgagaggcagcagaatgcaactgaggtagatgctttgccagtagaggagggggaagag
gcaatccagtatgggtcacagcagggtagaagagaaagtagtcaaagtgcagagggcaac
aacgagcaatctaggacaggcttgaaaaaaagcagtaagaaagtaaaaggcaagggaaaa
gaggactgccgaatgtcctag
DBGET
integrated database retrieval system
