Oncorhynchus nerka (sockeye salmon): 115129298
Help
Entry
115129298 CDS
T07952
Name
(RefSeq) histone deacetylase 3-like isoform X1
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115129298
Enzymes [BR:
one01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115129298
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
115129298
HDAC complexes
SMART complex
115129298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
115129298
NCBI-ProteinID:
XP_029515356
LinkDB
All DBs
Position
LG5:complement(6466937..6475522)
Genome browser
AA seq
428 aa
AA seq
DB search
MSNRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMQVFKPYKASQHDMCR
FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNH
KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFRIPLLVLGGGGYTV
RNVARCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRS
TVFENLKMLNHSPSVQIHDVPSDILSYERTDEGDPDERGSEDNYSRPEAANEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacagaacagcatatttttatgatccggatgtggggaactttcattatggtgct
ggtcaccctatgaaaccccatcgtctctcgctgacgcacagccttgttttgcactatggc
ctctacaaaaagatgcaggtttttaaaccatacaaagcctcacaacatgacatgtgccga
ttccactcagaagattacattgactttctgcagaaggtcagccccaacaatatgcagggt
ttcacaaagagtctcaacacctttaatgttggggacgactgccctgtattcccaggcctg
tttgagttctgctccaggtatacaggagcatctctacagggagcgacacagctaaaccac
aagatatgtgacatcgccatcaactgggccgggggtcttcatcatgctaagaaatttgag
gcctctggattttgctatgtgaatgacattgtcatcagtatactggagcttctgaagtac
cacccgcgtgtgttgtacatagacattgacattcaccatggtgatggggtgcaggaagcc
ttctacctgactgatcgggtcatgactgtatccttccacaagtacgggaactacttcttt
ccagggacaggtgacatgtatgaggtaggggctgagagtggccggtactattgcctgaac
gtgcctctccgggatgggatcgatgaccagagctacaggcaactctttcagccagtcatc
aagcaagtggtggacttctaccagccaacctgtatcgttcttcagtgtggggctgactct
ctgggctgtgacagattagggtgcttcaacctcagtatacgaggccatggggagtgtgtg
gagtttgtgaagagcttcaggattcccctgctggtactgggaggaggagggtacacagta
cgcaacgtggccagatgctggacctatgagacctccctcctggttgatgagccaattagt
gatgagctgccctatagcgagtactttgagtattttgccccagacttcacactccaccca
gatgtcagcaccaggatagagaaccagaactcccgacagtacctggagcagatccgttcg
acggtctttgagaacttgaagatgttgaaccattcccccagtgtccagatccacgatgtg
ccctcggacatcctgagctacgagcgcactgacgagggagacccagatgagaggggttca
gaggacaactattccaggccagaggcagccaatgagttctacgatggtgaccatgacaac
gacaaggagagcgatgtggagatttga
DBGET
integrated database retrieval system
