KEGG   Oncorhynchus nerka (sockeye salmon): 115129319
Entry
115129319         CDS       T07952                                 
Name
(RefSeq) lysine-specific demethylase 3B-like isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115129319
Enzymes [BR:one01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     115129319
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115129319
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2 C1_2
Other DBs
NCBI-GeneID: 115129319
NCBI-ProteinID: XP_029515396
LinkDB
Position
LG5:complement(7427707..7448386)
AA seq 1843 aa
MGDSLELIGKRLLLLLSDGRSAAGPEAEQSTWTRDWLRGTVRAVSVIGLASPGVEVSGGE
ATTTAAAGLTVFVEFEDCAWRRRSWVQVYGEEVRAVLVESAIVWANCSQPKQNHPAAGVT
SGTAWPALAFRCLVDRVGLGSLVPVEFFGSRTLDFLPDGNSLQRFETAKDVRHSLLLEQP
SLQAAVSSWHSDFELQEILRKGSYTVQGRKVQVYQCEFEEHWALGLVSRHDPKSHIMEIT
MDQGEETQVVDPRVIHVMLAEDHFDEKGKNARRRKESDGGKGESGRRRRTASEGEEDMTL
KRFKGSGEGAADGQNGSGSTKASEEGMVTWGAELAGGGRRVNSSSSEVTQVYASPNSTSS
QMDQSNTLPRYTKENGRALSTQDRQGSADSTTTVTPTPPPLKQAPSPFSNTSFPSLGQMP
SLVPGALAPKPSPAGPTLEREEPSQSTNTKMAALVSPGPVTISSPSQASAPSVALSASLG
FSPKPPVWKGTTNQSEGSKTPILAAAGFRLPQSKPAGASVFGEVSSKTSASSNTPSASQD
SSRPFGFAFGGSKNNKAQPKQQDQNLFFQCMTGQKTGQNPGGPNQNQTPGQSQSKDTNYF
TAVSESLSKKPPSLFKPSVLAPASAGLFSSATASLKEQSKVPETQSAGNGVLNRNFAGDK
LSPSFSSGSGGMRCSGLVMGAMDTPALGGANNRSGTNGVAVGGFGTKTDSHQNLFLQGSK
EPSNPFLAYGEKLSHSPFSGKPAPLEPETLGPSSASESKSNLFTMVELPKGILSSPFVSL
SAAAASSSSSPAPGFTQRPQSVTSSKPKESSSTGDQGSSAEGGSLDDRPSSTSGFPMFGS
AVAGGSGENVPMPFDQGQAQKFALEERGQASKRDSDSSDNSDLSDLSETEEGLERGHAPG
GLVGPVKEGAMLLQKGKGPGVAKSRPRNKPFKVGQSVLKDVTKVRRLKQSGESFLQDGSC
INVAPHLHKCRECRMERYRKYREQEPDDDDPNVACRFFHFRRLAFTRKGILRVEGFLSPQ
QSDAMAMGLWLPSPSVQEGLDLDTSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKR
AVRGVREMCDVCETTVFNIHWVCRKCGFGVCLDCYRQRRNRPMEEVDEGPDDEVFSWLKC
VKGQRHEPQNLMPTQIIPGTALYNIGDMVHSARGKWGIKANCPCTSRHHRPLVRPSAPNG
ISQQSAVSSSTGSSGSGPITGGGGPAGSTTPKPEGAEMTVVKTEPTSTTTSEGGGGGVDT
NGANHTSATPNPAQTPTPKDPRPSTGEGNSTALHWLADLATQKAKVEDTKDYGSMRLVMG
RDTRSPFGLDSFSALSKPSSSSSSPKLFNSLLLGSSNSQPKPEGSSLRDLLNSGPGRLPQ
GPGDSGVTFPSVFSTSVAGDKLKGSLPNFLDHIIASVVETKKAEGRRLGEGGSELGGVGR
RDGVMGLSVLDPHTSHSWLCDGRLLCLQDPSNTNNWKIFRECWKQGQPVLVSGIHKRLKG
ALWRPEAFSEEFGDQDVDLVNCRNCAIISDVKVRDFWDGFQIISKRLKGSDGQPMVLKLK
DWPPGEDFRDMMPTRFDDLMDNLPLPEYTKRDGRLNLASRLPNFFVRPDLGPKMYNAYGL
METEDRSVGTTNLHLDVSDAVNVMVYVGIPEGEGDHVKEMDIAGCKEVMTTIEEGDVDEM
TKRRVYEAKEKPGALWHIYSAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDGVL
RRRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQ
EFRHLSTTHSNHEDKLQVKNIIYHAVKDAVGTLRAHEPKLARS
NT seq 5532 nt   +upstreamnt  +downstreamnt
atgggggactctcttgaactgattgggaagcgacttctactgctcctcagcgatggaagg
tccgcagccggacccgaagcggagcagtccacttggactcgcgactggctccgggggacc
gtccgggctgtcagcgtcataggtttggccagcccaggggtagaggtgagcggaggagag
gcgaccacaacagcagctgcggggctgacggtgtttgtggagtttgaggactgtgcgtgg
cgcaggcgctcctgggtacaggtgtatggggaggaggtgagagctgtactggtagagagt
gccattgtctgggctaactgcagtcagcccaaacagaaccaccctgcagctggagtaacc
tctgggacagcctggccagctctggcgttccggtgtctagtggaccgtgttggtcttggt
tccctggtcccagtggagttctttgggagcagaaccctggacttcctccctgacgggaat
tcactccagagatttgagacagcgaaagacgtgaggcactctctcctactggagcagcct
tctctgcaggctgcagtttccagctggcacagtgactttgagctgcaggagatcctcagg
aagggctcctacaccgtccagggccggaaggttcaggtgtaccagtgtgagtttgaggag
cactgggccctgggcttggtctctcggcacgaccccaaatcacacatcatggagatcacc
atggaccagggagaggagactcaggtggtggatccccgggtaatacatgtgatgctggct
gaagatcactttgatgagaaagggaagaatgctcgacggaggaaggagagcgacggaggg
aagggcgagagcggccgtagacggaggacagcctcggagggcgaggaggacatgaccctg
aagcgctttaagggttcgggagagggagccgcagacggacagaacgggagcggctccacc
aaggcctctgaagaggggatggtgacatggggagcagagttagcaggaggaggacgcaga
gtgaacagcagttcctctgaagtcacacaggtttacgcctccccgaacagcacttcctcc
cagatggaccaatcaaacactctgcctcgctacaccaaggagaacggacgtgccctctcc
acacaagacagacaagggtctgctgactccaccaccacagtcacccccactccacccccc
ctcaaacaagccccctcccccttctccaacacttccttcccctctctgggccagatgccc
agcctggtccctggagctttggccccaaagccctccccagcaggacccaccctagagaga
gaagagccatcccagtctaccaacaccaagatggctgccctagtctccccaggcccggtg
accatctcatccccatctcaagccagtgcccccagcgtggctctctctgcctcccttggc
ttcagccccaaaccccctgtctggaaaggaacaaccaaccagtcggagggctctaagact
cccatcctggctgcggctgggttccggcttccccagtccaagcctgctggggcttccgtg
ttcggagaggtgagctccaagaccagcgcttcctccaacacaccgtcagcctcccaggac
tcctctagacccttcggatttgcctttggaggcagcaagaacaacaaggcccaaccgaag
cagcaagaccagaacttattcttccagtgtatgacgggtcagaagactggccagaaccct
ggtggtcctaaccagaaccagactccaggtcagagccagtctaaggacaccaactacttc
acagcagtgtcagagagcttgagtaagaagcctcctagcctgttcaagccctctgttctg
gccccggcatcagctggcctgtttagctcagctacagcttctctcaaagagcagtccaaa
gtgcctgagacccaatcggcaggcaacggagtgctcaacaggaattttgcaggggacaaa
ctctcaccttccttcagcagtggctctggggggatgaggtgttctggtctggtcatgggg
gcgatggacaccccagctctgggtggtgctaacaacaggagtggcactaacggtgtcgcg
gtgggcggcttcggcaccaagacagatagccaccagaacctgttcctccagggctccaag
gagccctccaaccccttcctggcctacggggagaagctctcccacagtcccttcagtggc
aaaccagcccctctggagcctgagaccctgggcccgtcttcagcttcggagagcaaatcc
aacctgttcactatggtcgagctgcccaagggcattctgtcttcccccttcgtctccctc
tcagctgccgctgcctccagttcttcctccccagcccctggcttcacccagaggccccag
tcagtcacctcctccaagcccaaggagagttcctccacaggagatcagggctcctcagct
gagggtggttctctggatgaccgacccagctccacctcaggcttccccatgtttgggagt
gcagtcgccggagggagtggtgagaatgtacccatgccttttgaccagggccaggcccaa
aagtttgccctggaggagcgaggtcaggcatctaaacgtgactctgactccagcgacaac
agcgacctgtcggacctaagtgagacagaggagggtctggagaggggccatgcacctggg
ggcctcgtggggcccgtcaaggagggagccatgctgctgcagaagggtaaagggcccggg
gtggccaagagccggcctcgcaacaagcccttcaaagtgggccagtcagtgctgaaggac
gtgactaaagtgcgtcgtctgaagcagtcaggagagtcattcctgcaggacggttcctgt
atcaacgtggcgccccacctccacaagtgtcgcgagtgtcgcatggagcgctacaggaag
taccgggagcaggagcctgacgacgacgaccccaacgtggcctgccgcttcttccacttc
cgcaggctggcattcacacgtaagggcattctgcgtgtggagggcttcctgagcccccag
cagagcgatgccatggccatgggactgtggcttccctcgccgtccgtacaggagggcctg
gacctggacacctccaagtacatcctggccaacgtgggagaccagttctgtcagctcgtc
atgtctgagaaggaggccatgatgatggttgagccacaccagaaagtggcgtggaagcgt
gcggtgcgcggtgtcagggagatgtgcgacgtatgtgagaccaccgtcttcaacatccac
tgggtctgcaggaagtgtggcttcggggtgtgcctggactgctaccggcaacgcaggaac
cgccctatggaggaggtggatgaggggcctgatgacgaggtgttctcctggttgaagtgt
gtaaagggccagagacacgagcctcagaacctcatgcccacacagatcatacctggaact
gctctctataacataggggatatggtgcactcagccaggggcaaatggggcatcaaggca
aactgcccctgcaccagccggcaccacaggcccctagtgcgccctagcgcccccaatggc
atctcacagcagtctgctgtctcttccagcacggggagcagtggtagtggaccaatcaca
ggtggcgggggtccagcgggttcaaccactcctaagccagagggggcggagatgacagtg
gtcaaaacagagcctacttccaccacaacgtcagaagggggaggagggggggttgatact
aatggggccaaccataccagcgccaccccaaaccctgcccagacccccacccccaaagac
cctcgcccctccacgggtgagggaaactccaccgccttgcactggttggcagaccttgcc
actcagaaagccaaggtggaggacacaaaagattatgggtcgatgcgccttgtgatgggc
cgggacacacgctctccctttggcctggactcgttcagtgccctgtccaagccttcgtct
tcctcctccagtcctaaactgttcaacagcctgctgctgggctccagcaacagccagccc
aaaccagagggctccagcctccgagacctgctcaactctggacccgggaggctcccccag
ggccccggagactctggagtaaccttcccatctgtcttctccacctcagtagctggggac
aagttgaagggcagcctgcctaacttcctggaccatatcatcgcctcggtggtggagacc
aagaaggcggagggccgtcgtttgggggagggcggcagtgagctaggcggggttggccgt
agggacggggttatgggcctcagcgtgctagacccccacacctcccactcctggctctgt
gacggacgcctgctctgcctgcaggacccttccaacaccaacaactggaagatcttcaga
gagtgttggaaacagggccagccggtgctggtgtctggtatccataagcgtctgaagggg
gctctgtggcggcctgaggccttcagcgaggagtttggggaccaggatgttgacctggtc
aactgtcggaactgtgccatcatctctgacgtcaaggttcgagacttctgggacggcttc
cagatcatctccaagcgtctgaagggtagtgatggtcagcccatggttttgaagctgaag
gactggcctcctggagaagacttcagagacatgatgcccacacggtttgatgacctaatg
gacaacctccccctcccagagtacactaagagagacggccgtctgaacctggcctcccgc
ctgcccaacttctttgtcaggccagacctggggcctaagatgtataatgcttatggtctg
atggagacagaagaccggagtgttggcaccaccaacctgcatctggatgtgtctgatgcc
gtcaacgttatggtgtacgtgggcatccctgagggagagggagaccacgtcaaggagatg
gatatcgctggatgtaaagaggtgatgaccaccatcgaggagggtgatgtggatgagatg
accaagaggagggtgtatgaggccaaggagaagcccggggcactctggcacatctactct
gccaaggacgccgagaagatccgcgagcttctccgcaaggtgggtgaggagcagggccag
gagaatccgccggaccatgaccctatccacgaccagagctggtacctggacggggtgctg
cgcaggaggctgtatgaggagtatggtgtgcagggctgggccatcgtacagttcctggga
gacgcagtcttcattcctgccggggctccccaccaggtccataacctgtacagctgtatc
aaggtggcggaggactttgtgtctcctgagcatgtgaagcactgtttcagactgacccag
gagtttagacacctgtccaccacacactccaaccacgaggacaagctgcaggtgaagaac
atcatctaccatgctgtaaaggacgctgtggggacactgagggcccacgaacccaagcta
gcacgctcttag

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