Oncorhynchus nerka (sockeye salmon): 115129398
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Entry
115129398 CDS
T07952
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04518
Integrin signaling
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
115129398
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115129398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129398
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115129398
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_1
SH3_9
CH
RhoGEF67_u1
PH
SOS1_NGEF_PH
CENP-Q
Mis12
ZapB
Motif
Other DBs
NCBI-GeneID:
115129398
NCBI-ProteinID:
XP_029515550
LinkDB
All DBs
Position
LG5:complement(9928990..9958320)
Genome browser
AA seq
766 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEEFLKTSLKDGVVLCKLMERLVPGTVPKYCPEP
RNEAECIANIKEFLRGCTSLKVEGFEPECLYSGEKFNKVLTTLLGVNFATQDCGTERSCP
QSGTPAPSQSTTSHTHTSSRSKSLPRQSKPAEMSENGGGGLVLVKARFQFKQNNEDELSF
NKGDLISVSRQEEGGWWEGSLNGKTGWFPSNYVREVKPCDKPVSPKASQLTKNYYTVVVQ
DILEHEREFVKELQTMLSCYLRPLKASNKLSITDSGSLSGNLEEILTFQQGLVLALDECT
KVPESQQRLAACYLNLIGQIRRLYRSYCSSHPSAVCVLTDHSEELGTFMESQGASPPGIL
TLTTSLSKPFMRLDKYPILLQELERHMEEAHPDYSDILKVTVAFKSLVAQCQDLRKRKNL
ELQILSEPVRGWEGDGMKSLGHVAYMSLVHMQNGTNEEKEERYLMMFPSVLVLLSASPRM
SGFIYQGRLPLTGSTVSRQTEDTENGHYTFEITGSTMDRITVFCSNPQELQEWLDHLHAY
SEGASPVGTIIKPVSMVGTPTHLPSFSTPSQANRGPLEPPKTTKPWSLSCLRPAPPLKPS
AALGYKERMSSILKDSSKSSGPIKNFFPKRRAERKHSDEEFLLRKSTAALEEDAQILKVI
EAYCTGASQHQASTAVKKVCVPQVLLPEEEKIMVEEMKNNGQTSIEEKSLVDAVYALKDE
VHELKKENKWMKQCMEEEQKSRKELERVVRKLAKQKNDCAWEDGGH
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaggagcagaccgtaacgtggctgatatcattaggggtgcttaattcaccc
aagaaaaacatagctgacccagaagaatttctgaaaacatctctgaaagatggggtcgtc
ttgtgcaaactcatggagcggctcgtgcccggcactgttccaaagtactgtccggaaccg
aggaacgaagccgaatgcatcgccaatatcaaggagtttctgagaggatgcacatcctta
aaagtagagggatttgaaccagagtgcctgtactctggcgagaaatttaacaaagtgctg
accactctgctgggagtcaacttcgccacccaagactgtggcactgagaggtcatgtccc
cagtccggcacacctgctcctagccagtccaccacctcacacacacacacctcttccagg
tccaagtccctgcccagacaatccaaaccagcagagatgtcggagaacggcggaggcggg
ctggtgctggtgaaggcgcgcttccagttcaagcagaacaacgaggatgagctgtccttc
aacaagggagacctgatcagtgtgtcgcgccaggaggagggcggctggtgggagggctcg
ctcaacggcaagacgggctggttccccagcaactatgtccgcgaggtcaagccctgtgat
aaacctgtgtctcctaaagcatctcaactgaccaagaactactacactgtggtggtgcag
gacatcctggagcatgagagggagtttgtcaaggagctgcagacaatgttgagctgttac
ctacgacccctaaaggccagcaacaagctgagcattacagacagtggcagtctgagtggt
aacctggaggagatcctcaccttccagcagggtctggttcttgctctggacgagtgcacc
aaagttccagagagccagcagcgattggctgcctgctacctcaacctgattggtcagatc
aggaggctgtaccggtcatactgttccagtcacccctcggctgtctgcgtactcactgac
cacagtgaggagctgggtacgttcatggagagccagggggccagtccgccaggcatcctg
accctgaccaccagcctgagtaaacccttcatgaggctggacaagtatcccatcctgctg
caggagctggagagacatatggaggaggcccacccggactacagtgacatcttgaaggtt
acggtggcttttaaaagcttggtggcccagtgtcaggacctgcggaaacgtaagaacctg
gaactacagatcctgtcggagccagtgagaggctgggagggagacggcatgaagtctctg
ggtcacgtggcctacatgtccctggtccacatgcagaacgggaccaatgaggagaaggag
gagcgctatctcatgatgtttcccagtgtgctggtcctgctgtctgctagtccgcgcatg
agcggcttcatataccagggaaggctgccgctgacaggctccacagtctccaggcagacg
gaggacacggagaacggccactacacctttgagatcacaggaagcacaatggatcgcatc
acagtgttctgcagtaacccccaggagctgcaggagtggctggaccatctccatgcctac
agcgaaggagccagtcccgtgggcaccattatcaagccggtcagtatggtgggcaccccc
actcacctgcccagcttcagcacccccagccaggccaaccgtggacccctggagcccccc
aagaccaccaagccctggtctctgagctgcctgcgccccgccccacccctcaagccctcc
gctgcactgggctacaaggagaggatgtcttctatcttgaaggactccagtaagagctct
gggcccattaagaatttcttcccaaaacgcagagcagaaaggaaacattccgacgaggag
ttcctcttacggaaaagtacagctgctctggaggaggatgcccagattctgaaagtgatc
gaggcctactgcacaggggccagccagcatcaggccagcacagcggtcaagaaagtgtgt
gtccctcaggtcctgctgcctgaggaagagaagatcatggtggaggagatgaagaacaac
ggtcagacaagcatagaggaaaagagtctggttgatgcagtatatgctttaaaggatgag
gtccatgaattaaagaaggagaataagtggatgaagcaatgtatggaggaggagcagaag
tctcgtaaggagctggagagagtggtcaggaagctggccaagcagaagaacgactgtgcc
tgggaggatggagggcactga
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