Oncorhynchus nerka (sockeye salmon): 115129408
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Entry
115129408 CDS
T07952
Name
(RefSeq) proto-oncogene DBL-like
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129408
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115129408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_2
Spectrin
Spectrin_6
CRAL_TRIO
Motif
Other DBs
NCBI-GeneID:
115129408
NCBI-ProteinID:
XP_029515573
LinkDB
All DBs
Position
LG5:complement(10536366..10571712)
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AA seq
1146 aa
AA seq
DB search
MGPASLQEETEQEPGGEMECYHSLLQAGSQLENTLQQVSVPMSMKEVDGYIEKQVAYLSG
GRGEDSSVIITLPEYSAFSDIPEESLAKVLTYLTLIPRARQPGVKFIIILDRRLDTWTSI
KTALARIAASFPGNLHLVLVLRPTSFFQRTVTDLGFRFSQEDFMLKMPVVMLSSVTDLLR
YIDENQLTSEFGGTLDYCHSDWIVLRTAIESFAVTVKDIAHMLQAFGTKLAETELPDEGT
AIVHLLSTHTDKYRKLKEAIWSVSKEGRHLLASLEASGREEDSLWDIRLDWETVQRLLAQ
LRDMESAFDGFFEKHHLKLQQYLQLLRYEHSFQEMELSLERLATQEREVSLSGETLTQTE
QTLRDLDSLEAHAQEEMARAQTIILHGHQLAACHHYAMALIVQRCNELRHRCDTLSKALR
AKHTHLSQAYQLMLRLDQAQSWCDDGAYLLAQQLVEKFQSKEGAQAALKDIDRFLEGAPS
LLSSGHDLLAVEFESVLTPEIQVQMGKTFEKHTAVQEMIHNRQVCLRKLADKHIRPIQLV
APRPENPPRSKSPLFSPKHGVDGLKFSFDLSLPGKRTSRKSPGSRKIEVMHDYQENRSSL
LSSLEGEDSPDLLKRHVMRELIETERVYVEELLSVLLGYRGEMENPGLSGLLPPILQSKK
DILFGNMPEIYNFHSRVFLQDLEGCLETPEGVGACFLERKENFQVYECYCQNKSRSESLW
RQFSDCAFFQECQKKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSPGGCEGTSELQGA
LAAMLDLLKSVNDSMHQIAITGLPGGLSDLGRVLMQGSFSVWISHKKGPTRMKELARFKP
MQRHLFLYERALLFCKRREEHGEGADKTPSYSFKHCLKMSAVGITENVKGDVKKFEIWYS
GREEVYSVQAPTVEVKMAWLNDLRRILTNQQKLLKGFGCHSHHSPKHTQQRVGLIHLRHP
LSGSLFLSDEHCVINQMPEHIQLSPPLSESKQQRASISSEDTESGRSSPDPQSHSLQHRR
NRRSWPGAPHSLDICEGLEEWGGGEDPSQPSDTEEEDAAQLAPGRYKALAECSRYGPDDL
TIKSGDVIQLQHEDSEGHWLVKNLSRRQEGIIPVPNLHMILGNGSRGQSTRLGDPGNLKA
RKLSSP
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgggcccagcttcactgcaggaggagaccgagcaggagccagggggagaaatggagtgc
taccacagccttctgcaggctggctctcagctagagaacacactacagcaggtgtcagtc
cctatgagtatgaaggaggtggacggctacattgaaaagcaggtggcctacctgtcaggt
gggcgtggtgaggactccagcgtgattatcaccctcccagaatactctgctttcagcgac
attccagaggagtctttagctaaagtcttaacatacctcaccctcatacctcgagcacga
caaccaggtgtaaaattcatcatcattttagacagacgactggatacttggacctcaatc
aaaacagcacttgccagaattgcggcctccttccctgggaacctccacctggtgctggtg
ctgagacccaccagcttcttccagcgcaccgtcacagacctgggcttccgcttcagccag
gaggacttcatgctcaagatgccagtggtgatgctgagctctgtgacagacctactgaga
tacattgatgaaaatcaattgacctcagagtttggtggaaccctggattactgccacagt
gactggatcgtcctgagaacagccatagagagctttgcggtgacagttaaggacatagct
catatgctgcaggcgtttggcacaaagctggcagagacagagctgccagatgagggcacc
gccatcgtacacctcctctcaacccacactgacaaatacaggaaactcaaggaggcgata
tggtctgtatcaaaggagggtcgccacctgctggctagcctggaggcctctgggagagag
gaggattcactatgggatatcaggctggactgggagactgtgcagaggctactagcccag
ctgagggacatggagtcagcctttgacggcttcttcgagaagcatcatctgaagctccaa
cagtacctccagctgctcagatacgaacacagcttccaggagatggagttgtctctggag
cgtctggcgacccaggagagggaggtgtcgttgtcaggggagacgctgactcagacagaa
cagacactcagggacctggacagcctggaggctcacgcacaggaggagatggcccgtgcc
cagaccatcatcctccatggtcaccagctggcagcctgtcaccactacgccatggccctg
atcgtgcagcgctgcaacgagctacgtcaccgctgtgacacgctcagtaaggctctgagg
gccaaacacacacacctctcccaggcctaccagctgatgctacgcttggatcaggcccag
agttggtgtgacgacggggcctacttgttggcccagcagctggtggaaaagttccagtct
aaggagggggcccaggctgctctgaaggacatagacagattcctggagggggctccgtct
ctcctcagctcaggacatgacctcctggccgtggagtttgagtctgtcctcaccccagag
atacaggtccagatggggaagacatttgagaagcacacagcggtgcaggagatgatccac
aacagacaggtctgtctgaggaagctggctgataaacacatccgtcccattcaactggtg
gccccccggccagagaacccaccccgttccaagtccccactattctcccccaaacatggg
gtcgacggtttgaagttctccttcgatctatcacttcctgggaagaggacgtcacggaaa
agccccggctccagaaagattgaggtgatgcatgactaccaggagaataggagctccctg
ctctccagcctggagggagaggacagcccagaccttctcaaacgtcacgtgatgagggag
ctaatcgagacagagagagtctatgtggaggagctgctgtcagtgctgctgggatacagg
ggagagatggagaatccaggcctttcagggctcctgccccccatcctgcaaagtaagaaa
gacatcctgtttggaaacatgcctgagatctacaacttccacagcagggtgttcctgcag
gacctggagggctgcctggagaccccagagggagtaggggcctgctttctggagcggaag
gagaatttccaggtgtatgagtgttactgtcagaataagtctcgctctgagtccttgtgg
aggcaattctccgactgtgcctttttccaggagtgtcagaagaagctggagcacaaactg
ggcctggattcttacctgctgaaaccagtacaacgccttaccaagtaccagctactactg
aaggagctactgaagtacagtccaggaggctgtgaggggacctcggagctacagggggcg
ctagcagccatgctggacctcctcaagtcagtcaatgactccatgcatcagattgccatc
acggggctaccaggtgggttgtctgacctgggccgggtgctgatgcagggctccttcagt
gtgtggatcagccataagaaaggccccacccgtatgaaggagctggcccgcttcaagccc
atgcagagacacctgttcctgtacgagagagctctgctcttctgcaagcgcagggaggag
catggagagggtgcagacaagaccccctcctacagcttcaagcactgtctcaagatgagt
gcggtggggattacagagaacgtcaagggagatgtgaaaaagtttgagatctggtacagt
ggcagggaggaggtgtactcagttcaggcccccacagtggaggttaagatggcttggctc
aatgatctgcgaaggatcctcaccaaccagcagaaactccttaaaggttttggatgtcac
tcacatcactctccaaagcacacccaacaaagagttggtttaattcatctcagacatcct
ctctctggttctctttttctctcagatgagcattgtgtcatcaaccagatgccagaacac
attcaactgtctccgcccttgtctgagagcaaacagcagagggcgtcgatcagctccgag
gacactgagtcagggaggagcagtccagacccccagtcccactcccttcaacaccgacgc
aaccgacgcagctggcccggtgcacctcactcattagacatctgtgagggtctggaggag
tggggtggaggtgaggacccctctcagccttcagacaccgaggaggaggacgctgctcag
ctggctccaggcagatataaggccttggctgaatgttcacgatacggcccagatgacctc
accatcaagagcggtgatgtcatccagctgcagcacgaggacagcgaaggccactggctg
gtgaagaacctgagtcgcagacaggagggtatcatcccagtccccaacctgcacatgatt
ctgggaaacggcagtagaggacagtccaccagactaggagatccagggaatctgaaggcc
agaaagctcagctccccttaa
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integrated database retrieval system
