Oncorhynchus nerka (sockeye salmon): 115129450
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Entry
115129450 CDS
T07952
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115129450
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115129450
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115129450
Enzymes [BR:
one01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
115129450
Amino acid related enzymes [BR:
one01007
]
Aminoacyl-tRNA synthetase
Class II (A)
115129450
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115129450
Prokaryotic type
115129450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
115129450
NCBI-ProteinID:
XP_029515663
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All DBs
Position
LG5:complement(11700229..11704968)
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AA seq
523 aa
AA seq
DB search
MINLGMASLRLYAGLVGCRSGFCARFLRTLSGMTVSQIDEEVAKLLELKVQLGGDEGRHQ
FTLKTAKGTRDYNPKQMAIREKVFNTIIGCFKRHGAENIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYLAMNKVTNIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDPMIPDAECLKIVHEILSELELGDFRIKVNDRRILDGMFAVCGVPDDKFRT
ICSTVDKLDKMSWEDVRSEMVKEKGLSEEAADQIGQYVSLQGGMDLAERLLQDAKMSQSK
QACAGLTDMKQLFSYLQLFQVTDKVVFDLSLARGLDYYTGVIYEAILTQTGPVPVAAAQN
GEGEKAEEGVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERVFSIMEQKAEASAE
KVRTTETQVMVASAQKNLLEERLRLTAELWNAGIKAEVMYKKNPKLLSQLQHCEDSGIPL
VAILGEQELKDGVVKLRTVHSREEIDVSRAKLVEEIKRRTSDV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgattaacctgggtatggcgtccctgcgtctttatgcggggttggtgggctgtcggtct
ggattttgtgcccgctttctacgtaccctctctgggatgactgtgtctcagattgatgag
gaagtggccaaactgctagagctgaaggttcagcttggaggagatgaaggcagacaccaa
ttcacgctcaagaccgcaaagggaaccagggactataaccctaagcagatggccatcaga
gagaaagtcttcaacaccatcatcggctgttttaaacgccacggagccgagaacatcgac
acacccgtctttgagctgaaggaaacgttgacaggaaagtatggtgaggattctaagctc
atctacgacctgaaggaccaaggaggagagctgctgtcccttagatacgatctcactgtg
cctttcgcccgttacctcgccatgaacaaggtcaccaacatcaagcgctaccacattgcc
aaggtctatcgccgtgacaaccccgccatgacccgcggccgctacagggagttctatcag
tgtgattttgacattgcaggccagtacgaccccatgatcccagacgctgagtgcctgaag
atcgtccacgagatcctgagtgagctggagctgggtgacttccgcatcaaggtgaacgac
agacgtattctagatgggatgtttgcagtgtgtggagttccggatgacaagttccgcacc
atctgctccacagtggacaaactggacaagatgtcttgggaggatgtgaggagtgaaatg
gtgaaggagaagggtctgtctgaggaagcagccgatcagatcggacagtatgtcagcttg
cagggggggatggacctagctgagcgcctgctgcaggatgctaagatgtcacagagcaag
caggcgtgtgccggcctcacagacatgaagcagctcttcagctacctgcagctcttccag
gttacagacaaggtggtgtttgacctgagtctggcccgtgggttggactactacacaggt
gtgatttatgaggccattctgacccagaccggcccggtcccagtggcggcagcccagaac
ggggagggcgagaaggctgaggaaggtgtgagcgtgggcagcgtggcgggcggtgggcgc
tacgatggcctggtgggcatgttcgaccccaagggcaggaaggtgccgtgtgtgggggtc
agcatcggcatcgagagggtcttctccatcatggagcagaaggctgaggcatcggcggag
aaggtgcgaaccacagagactcaagtcatggtggcctcggcacagaaaaaccttctggag
gagagactccgactgaccgctgaactgtggaacgctgggatcaaggcagaggtgatgtat
aagaagaaccccaagctgctgagccagctgcagcactgtgaggactctgggatccccctg
gtggcgatcctgggtgagcaggagctcaaggacggggtggtgaagctccgaacggtccac
agccgagaggagattgacgtgtccagagccaaactagtggaggaaatcaagagaaggacc
tctgacgtctaa
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