Oncorhynchus nerka (sockeye salmon): 115129452
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Entry
115129452 CDS
T07952
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115129452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129452
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115129452
04031 GTP-binding proteins [BR:
one04031
]
115129452
Membrane trafficking [BR:
one04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
115129452
Others
Specific organelles associated proteins
Auto phagosome
115129452
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115129452
GTP-binding proteins [BR:
one04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
115129452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
SRPRB
G-alpha
PduV-EutP
Septin
ATP_bind_1
AAA_25
TniB
AAA_24
AAA_22
Motif
Other DBs
NCBI-GeneID:
115129452
NCBI-ProteinID:
XP_029515668
LinkDB
All DBs
Position
LG5:complement(11770396..11773494)
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AA seq
239 aa
AA seq
DB search
MASVESSTEFTSSLTVSSHLPPPRTRIFKIIVIGDSGVGKTCLTYQFCAGKFPEKTEATI
GVDFREKLIEIDGEKIKVQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDVTSAASFRSLP
AWIEECKQHALGQEVPRILVGNKCDLQNSVQVGTDLAQQFADAHSMPLFETSAKNPSSNG
HGDGSHGNSDHVEAIFMTVAHKLKSQKPLILSQLPGGDTVTLTRGRDEGEEKASWACMC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgtggagtcgtcgacggaattcactagttcgctgactgtctcgtctcatctt
ccgccaccacggacgcggattttcaagatcatcgtgattggggactccggtgtgggcaag
acatgcctaacctaccaattctgtgcgggcaagtttccggagaaaaccgaggccacgatc
ggggtggactttcgggagaaacttatcgagattgacggcgagaaaatcaaggttcagcta
tgggacacggcaggccaggagcgtttccgtaagagcatggtgcagcactactaccgcaac
gtgcacgctgtggtgttcgtgtacgacgtgaccagtgccgccagcttccgcagcctcccg
gcctggatcgaggagtgtaagcagcacgctctgggccaggaggtcccgaggatcctggtt
gggaacaagtgtgacctgcagaactctgtccaggtgggcacagacttggcccagcagttt
gcggacgcccactccatgcccttgttcgagacatctgccaagaaccccagcagcaatggt
catggcgacggtagccatggtaacagtgatcacgtggaggccattttcatgacggtagcc
cacaagctgaagtcccagaagccactgatactgagccagctgcccgggggggacacggtg
accctgacgaggggaagggacgagggcgaggagaaggcgagctgggcctgcatgtgctga
DBGET
integrated database retrieval system