Oncorhynchus nerka (sockeye salmon): 115129467
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Entry
115129467 CDS
T07952
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115129467 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115129467 (zcchc7)
03016 Transfer RNA biogenesis [BR:
one03016
]
115129467 (zcchc7)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
115129467 (zcchc7)
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
115129467 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
115129467
NCBI-ProteinID:
XP_029515695
LinkDB
All DBs
Position
LG5:complement(13013983..13028120)
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AA seq
497 aa
AA seq
DB search
MMMGHQNDEEEGGNKDNRFYIEASSSSEGELGFSQYKQSSSPRAPQATGGNSPLVLAFPL
SSGRALRDVSPLDSSPSPNSRLNLHSEQVLDLEYDDDVLEEWMILGGEEQEGDGDIQLNL
GYWSSSSESHSGTEDEELNAKYALKHNWAIIEKDKPRPYRYFTSDRSLTCHNCNKTGHLA
KGCTTPRRRPTCVLCGLQGHVQRACPGRHCHSCGLPSHGYQPCPEPPFWNQHCHRCGMAG
HLSDACPDTWRQFHFTTQQEVPLRPHVDHTHKHCRHTAHCYNCSRRGHLGHECTQRRMIS
GTFASLPYVCHYDNKQDIVKLNTRIHRKARELRVEGFMPLLEHQRTYETPGGSSEEERPS
PAPGRRRSLEGRRKTWPERRRERREVKKLRREAQARRAVGTTKWGSDEVVYTRDHFKNPH
REPIPTPHKKRRREERRESKSEERSRKGRSKESSRKNREAEWWKKRGGLKRGYLYPGDDL
GPMNDYLLSPKNRVRIL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgggccaccagaatgatgaggaagagggtggtaataaagacaacagattctac
atcgaggcctccagtagctcagaaggtgagctggggtttagtcagtacaaacagtccagc
tcaccgagagctccccaggccactggaggaaactctcccctagttctggccttccctctc
tcgtctggccgggctctacgggacgtgtcgccactggacagcagcccaagcccgaactcc
aggctaaacctccactcagagcaggtcctggacctggagtatgatgatgatgtcctagag
gagtggatgatcctgggaggagaggagcaggagggagatggggacattcagctcaacctg
gggtactggagcagcagctcagagtcgcattctggaacagaggatgaagaactgaatgca
aaatatgctctcaaacacaactgggccataatagagaaggacaagccacgcccataccgc
tatttcacctctgaccggagtctcacctgtcacaactgcaacaagactggacacctggcc
aagggctgtaccaccccgaggaggcgacccacctgtgtgttgtgtgggctccagggccat
gtccagagggcctgtccaggccggcactgccacagctgtgggctcccctcacacgggtac
cagccctgccctgaaccccctttctggaaccagcactgccaccgctgtgggatggctggc
cacctatcagatgcttgtccggatacatggagacaattccacttcacaactcagcaggag
gttcccctcaggccacacgttgaccacacccacaaacactgcagacacaccgctcactgc
tacaactgctccaggagaggacacctcggccatgagtgtactcagaggaggatgatcagt
gggacgtttgcctcgctcccctacgtctgtcactacgacaacaagcaggacatcgtcaaa
ctgaacaccaggatacacagaaaagccagagagctaagggtggagggcttcatgcctctg
ttagagcaccagaggacctacgagacaccagggggcagtagtgaagaggagcggccctcc
ccagctccagggaggaggagaagcctggagggcaggaggaagacgtggccggagagacgc
agggagagacgggaggtgaagaagctgaggagagaggcccaagccaggagggcggttggg
acgaccaaatggggctcagacgaggttgtttacaccagggaccactttaagaacccccac
agagaacccatacctacccctcataagaagagacgccgtgaggaaaggagggagagcaag
agtgaggagaggagtaggaagggcagaagtaaagagagcagtaggaagaatagagaagca
gagtggtggaagaagagaggagggctgaagcgtgggtacctgtaccccggtgatgacttg
ggacccatgaatgattacctcctctcccccaaaaatagggtgcgaattttataa
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integrated database retrieval system
