Oncorhynchus nerka (sockeye salmon): 115129469
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Entry
115129469 CDS
T07952
Name
(RefSeq) syntaxin-3-like isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115129469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129469
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115129469
Membrane trafficking [BR:
one04131
]
SNARE
Syntaxin (Qa)
Stx-PM
115129469
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
115129469
Exosomal proteins of other body fluids (saliva and urine)
115129469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
Syntaxin_2
Relaxase_C
ArAE_1_C
EspB_PE
AAA_13
PI_PP_C
DUF6115
YtxH
Fib_alpha
DUF6827
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
115129469
NCBI-ProteinID:
XP_029515701
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All DBs
Position
LG5:complement(13060966..13082624)
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AA seq
330 aa
AA seq
DB search
MKDRLEQLKATCDNDDEEVEIAIDNAAFMDDFFSQIDDIRISIDKIDENVSEVKKLYSVI
LSAPTSDQKTQDDLEAVTNNIKKMANNARNKLKTIERDLASEEEERISADMRIRKSQHAV
LSRKFVEVMTKYNEAQVDFRERSKGRIRRQLEITGKATTDEELEEMLEGGNSAVFTSGIM
DSGISKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQVHVSSSDPSIQSLIDSS
IHYFTSAFLNPTVLLSLFLSRLRPRSLSVICFSFLFSSTLFPFSFRSAFFPLSMLWDRSS
LCVCVHPSICLPPITHSSSVGVYILSKSHI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggaacaacttaaagcaacatgtgacaatgacgatgaggaagtggaa
attgctattgacaatgcagcttttatggatgactttttctctcagattgacgacatcagg
atcagcattgataagattgatgagaatgtgtctgaagtcaagaagctctactcggtcatc
ctgtctgcccccacgtcagaccagaaaacacaggatgacttggaggctgtcaccaacaac
atcaagaagatggctaacaacgcccggaacaaactcaaaaccatcgagagggatctggcg
tctgaggaagaggagaggatttcagccgacatgcggatacgcaaatcacagcatgcagtg
ctgtccaggaagtttgtggaagtgatgaccaagtataatgaggcccaggtggacttcagg
gagaggagtaaaggacgcatccggagacagctagagatcactggaaaagccacgacagat
gaggagctggaagagatgttagaggggggaaactctgctgtcttcacttcagggatcatg
gactctgggatctcgaagcaagctctcagtgagatcgaggcgcgacacaaagacattgtg
cgtctggagagcagcatcaaagagctgcatgacatgttcgtagacatcgccatgctggtg
gagagccaggtacacgtctcgtcctccgatccgtctattcagtcattaattgattcctcc
atccactatttcacatctgcatttttaaaccctactgtcctactgtctttgtttctgtct
cgtttgcgtcctcgttccctgtctgtcatctgtttttcctttctcttttccagtaccctc
ttccctttctccttccgcagtgctttttttcctctctccatgctttgggacagaagttcc
ctgtgtgtgtgtgtccatccatccatctgtctccctcccatcactcattcatcttcagta
ggagtctacattctcagtaagagtcacatttga
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