Oncorhynchus nerka (sockeye salmon): 115129500
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Entry
115129500 CDS
T07952
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115129500
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
115129500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
TPR_GEMI5
Beta-prop_WDR35_TULP_N
B-prop_COPA_B_2nd
TPR_9
Motif
Other DBs
NCBI-GeneID:
115129500
NCBI-ProteinID:
XP_029515772
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Position
LG5:13956488..13977781
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AA seq
1319 aa
AA seq
DB search
MRNLRLLKSLRCLKLQGPGTPQCFTIRTDTGTLLIASEYSVTELDTRAGQVVNEVSLTVE
SYLPEDGGGTVVGIQDLPDQESVCVATATGDVILYNLNTNQLESVDSGLSAMSWSPDQEL
VTLTTGQDTIIMMTKNFEPITEVGIHQDDFGAGKFITVGWGKKETQFHGSEGKHAAQRKT
IEVQPAMSWDDRRPRVTWRGDGQLFAVSSVCPLTGARKVRVWNRECVLQSTSETVNGLEQ
SLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKELLWNSDSTVLA
VWLEDMTPGEGGQVNTYIQLWTVGNYHWYLKQNLYFGSDPQRAPAYVSWDPERPLRLHLV
TRGWVSLNYDWGWSTDRSHGEDGHDNANVAVIDGDKLLVSTFRQCVVPPPMCAYDLQLPA
PVNLVTFQRQRTNELAALTADGHISVYGQGTEKLSAPAAGLGGFRSVTHAPQLKTTYRVA
VDQEEPLALRLLLWLREDVFLGVGACTDGPSQSKMLILGPSEAQGPQPTLEIRSHVEVEG
HVISMCHSSKTGTVALQLEDGQIRKFLWDSLKPSVVEWQDSTGCRINFPDPCVQTALFTI
EEEHLLGLTDRSHLFVGETEVASNVSSFVVYDDFLLLTTHSHTCRCFRLTTLTVKGLQVA
LAADGGQNQNDQNDETLRRIERGSRIVTVVPQDTRLILQMPRGNLETIRHRALVLAQLRK
WLDSQRFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELKEED
TTTTMYPCPVNTTGQSALAACGKKVDIVCDVLRCTMESMDQHKYCLSILTSHVKKTVPEL
EVALQKVHELRVNPPSAGNAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAEKSQ
KDPKEYLPFLNMLKTLEPNYQRYSIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQRLY
SEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEATRALQAFVGSASWRNA
LCVAEQIPLPSDQLALLARDLAEKLIELRRYTEAAILLERYAKDCEEAISALITGAVWEE
ALRLVYLYNRQDIIETNFKPALLEACSSQASYLEAQKAMFTRHKTRLSVVRELKEKARLE
LLDEDVPDCPEAELYSEASSVMTGSHAGSKYSHSNSRISSRSSKNRRKAERKKLSLKEGT
PLEDMALLHALAEIIHSVDKMREEVHSLLKALVLFQFDGQARRLQHAYGEALQMIEVALP
EVWQEGLQQTQAPITGPNSTANSIMASFQQPRPSATQDSETPPTPKMRNGVKWKLSILK
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttgaggttgctgaagagccttcgttgcttgaagctgcaaggcccgggcacg
ccgcaatgtttcactattcggacggacacaggcaccttgctcatcgcttcagaatactcc
gtcacagagttggacacacgagctggccaggtggtgaatgaggtgtcgttgacagttgag
agctatcttccagaggatggtggtgggacagttgttggcatccaagacttaccagaccag
gagtctgtgtgtgtggcaacagccactggtgatgtcattctctacaatctcaacactaac
cagctggagagtgtggacagtggtctgtcagccatgagctggagcccggaccaggagctg
gtcactctcaccactggtcaggacaccattatcatgatgaccaaaaactttgaacccatc
acggaggttgggatccatcaggatgactttggagcggggaagtttatcacagtgggctgg
gggaagaaagagacacagttccatggctcagagggcaagcacgctgcccagaggaagact
atagaggtgcagccggccatgtcgtgggacgaccgcaggccgagggtgacgtggagagga
gacgggcagctcttcgctgtgagctcagtttgccccctgactggtgccaggaaggtcaga
gtgtggaacagagagtgtgtcttacagtcgacaagtgaaaccgtcaatggtctggagcag
tcactgtgttggaaaccatcaggtagtttgatagcggccacacagcgtcatcctaacaag
cacagtgtggtgtttatggagaagaacggcctcctacacggcgacttcaccctgcccttt
ggcaaagaacaggtcaaggtgaaggagctgctatggaacagtgactcaactgtgttggct
gtgtggctggaggacatgacaccgggagaggggggtcaagtcaacacatacattcagctg
tggacagtaggtaactaccactggtacctgaagcagaacctgtacttcggcagtgacccc
cagagggcaccggcctacgtgagctgggatcctgagaggcccctgcggctgcacctggtg
acccgaggctgggtcagcctgaactacgactggggctggagcaccgaccgcagccacggg
gaggacgggcatgacaacgccaacgtggccgtgatcgacggcgacaagctcctcgtgtca
acgtttcgtcagtgtgtggtgcccccgcccatgtgtgcctacgaccttcagctgcccgcc
cccgtcaacctagtgaccttccagcgccagaggaccaatgagctggcagcgctcacagcc
gacggacacatctctgtctacggccaaggtactgagaaactgagtgcgcctgcagccgga
ttgggaggattccgatctgtcacacacgcccctcagctaaagacaacctacagggttgcg
gtggatcaggaggaacccctggctctgcgtctgctgctgtggctgagagaggatgtgttc
ctgggggtgggggcctgtacagacgggccgtcccagtccaagatgctcatcctgggaccc
tcagaggcccagggcccccagccaaccctggagatcaggtcacatgtggaggttgaaggt
cacgtgatcagcatgtgtcacagctccaagacgggcacggtggcgctgcagctggaggac
ggccagatcaggaagttcctctgggactctttgaaacctagtgtggtggagtggcaggac
tcaacaggctgcagaatcaacttcccagatccctgtgtgcagacagccctctttaccata
gaagaggagcatctgttagggcttacggaccgatctcacctgtttgttggtgagacagag
gtggcctccaacgtttcctccttcgtggtctacgacgacttcctgctgctcaccacacac
tcgcacacttgccgctgcttccgactcaccacgcttactgtcaaagggctgcaggtggcc
ttggctgctgacggaggtcagaatcagaatgaccagaatgacgagactctccgcaggata
gagaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatcctacagatg
cctcgcggtaacctggagaccatccgccatcgagcactggtgttggctcagctccgaaag
tggctggacagtcagaggttccgagaggcctttgagtgcatgaggaagctgcggatcaac
ctcaacctgatctacgaccacaaccccaaggtgtttttagagagcgtggagactttcctg
agacagctggactctatcaatcacatcaacctgttcctcacagagctcaaggaggaagat
accactacaacaatgtacccttgtccagtgaacactacaggacagtcagcccttgcggct
tgtgggaaaaaggtggatattgtctgtgatgtgttacgctgcaccatggaatctatggac
cagcataagtactgtctgtctattttgacgtcacacgtgaagaagactgttcctgagctg
gaggttgccctgcagaaagtccacgagcttcgagtgaacccacccagtgctggcaacgca
gtgagtgcggaggaggctctgaagtacctcttgttcttggtcaatgtcaacgagctgtat
gaacactctctgggcacctacgactttgacttggtcctcatggtggccgagaagtcccaa
aaggaccccaaagagtaccttcccttcctgaacatgctgaagactctagagcccaactac
cagcgctattccatcgacaaacacctcaagagatacaggaaggccttgcatcacctcagc
aagtgtggtgaggagcacttcaccgaggccctgaatctggtgaaggaccagaggctgtat
agtgaagccctgggtctctacccaacagacagccctcagtacaaggcgctgagctgtgcc
tacgccgagtacctggtggagcagcagcaggcggagcaggcagggttgttgctgtggcgc
tgcggcgaggcgacccgcgccctccaggcctttgtgggcagtgccagctggaggaacgcc
ctctgtgtggcagagcagatccccctgccatccgaccagctggcattgctggccagggac
ctggcagagaaactgatagagctcagaagatatacggaggcggccatattgttggagcgg
tatgccaaggactgtgaggaggccatctcagctctgatcacaggtgcagtctgggaagaa
gcacttcgattggtgtatttgtacaacagacaagacataattgaaacgaacttcaaacca
gctctcttggaagcatgtagttctcaggcctcttacctggaagctcagaaggcgatgttc
actcgtcacaaaacccgtctgtccgtggtacgggagcttaaggaaaaagccaggctggag
ttactggatgaggatgtcccagactgtccggaggcagagctctactcagaggccagtagt
gtgatgacaggcagccatgctggctccaagtactcgcatagtaactcccgcatctcctcg
aggtcgtctaagaatcgccggaaggccgagcgcaagaagctgagtctgaaggaagggacc
cccctagaggacatggccctgctgcatgccctggcagagatcatccactctgtggacaag
atgagagaagaggtgcacagcctgctgaaggccctggtgctgttccagtttgacggacag
gcgaggaggttgcaacatgcctatggggaggctctccagatgatagaggtggcccttccc
gaggtgtggcaggagggtcttcagcagacccaggcaccgatcacaggtcctaactccaca
gccaacagcatcatggcttcatttcaacagccaagaccctcagcaacccaagattcagag
accccaccaaccccaaaaatgagaaatggtgtcaagtggaagctgagtattctgaagtag
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