Oncorhynchus nerka (sockeye salmon): 115129535
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Entry
115129535 CDS
T07952
Symbol
tbc1d9b
Name
(RefSeq) TBC1 domain family member 9B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129535 (tbc1d9b)
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115129535 (tbc1d9b)
Endosome - Golgi transport
Rab GTPases and associated proteins
115129535 (tbc1d9b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
115129535
NCBI-ProteinID:
XP_029515835
LinkDB
All DBs
Position
LG5:complement(16374083..16393936)
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AA seq
1231 aa
AA seq
DB search
MWITPEEVLLANALWVSERANPFFILQRRKGHGKGGGITGLLVGTMDVVLDSSARVAPYR
ILHQTGDSQIFWSIACGSSRKEITGHWEWLETNLLQTLSIFDNDEDITTFVKGKVSGIIA
EENKSKAAQEDEDSGKFREAEQKMRKLFGMPGEEKLVNYYSCSYWKGRVPRQGWVYLSVN
HLCFYSFLLGKEVTLVVQWTEVTRLEKNATLVFPESVRVSTRHTEHYFSMFLNINDTFKL
MEQLATIAMRQLLDNEGFSADRTLPKACKTLKNVSALKRDLDARAKNERYRALFRLTPDE
RLDGHTDCTLWTPFAKMHIVGQLFVSNNYICFCSREEDLCQLIIPLREVSIVEKADSSSV
LPCPVSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPDKLWSDGHPLALSGYSVSPSPS
TTPLSSSLPTPTGAGGEPSQGRHYSPSLPTATQGLLRIYQKDDPEDHGPKATKEKMKEES
WNIHFFEFGRGVCMYRTSKTRELVLNGIPESLRGELWLLFSGAQNEMATHPGYYAELVEQ
AMGRCTLATEEIERDLHRSMPEHHAFQNEMGIAALRRVLTAYACRNPGIGYCQAMNIVTS
VLLLYCTEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRECLPLLYEHMQELG
VISTISLSWFLTLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHANMDTLLGCSDEG
EAMTILGRYLDNVVNKQTVSPPIPHLHALLTSGDEPPPEIDVFQLIKSSYDKFGSLRADV
IEQMRFKQRLKVIQSLEDTAKRSVVRAIMTDSAFSIEELEELYVLFKAKHIMSCYWGASC
TAAERHDPSLPYLEQYRIDLEQFCQLFGALGTWLCGTHTVTLAARHFRLLDSNKDGLINF
KEFVTGLSGMYHGDMTEKLKLLYKLHLPPALCPEEAESALEAAQFFTDDDSPQESPFLSD
LDFLVQEVTSGEEMKEAGEASGCGDAEEKKEVKDYKYYLRMWAKEKEPKIETIKDLPRMN
QEQFIELCKTLYNMFSEDPLEQELYHAIATVASLLLRIGEVGKKFTNNCAKKPTDTTYTQ
GPTLSAELPQPEKEESNGESSSGQSLVCKALAEAQLETPPQQTSDEEVKDDTSVSSYSMV
STGSLQCEDIADDTVLIGCAGDQQRRGSTLDGDWSITFEQVLASMLTEPPLVDYFEKKGD
IQARMATCKMQRGVERQVSSSSDHELAQLST
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtggataactccggaggaggtgttgctggccaacgctctgtgggtgagcgaaagggcg
aacccctttttcattctccagcggagaaagggccatggaaaaggagggggcatcactgga
ttgttggtgggcaccatggatgtggtcctggactccagtgccagagtggctccctatagg
atcctgcaccagacaggggactcccagatcttctggagcatcgcttgtggctcctcccgg
aaggagatcacggggcattgggagtggctggagaccaacctgctccagacgctctccatc
ttcgacaacgacgaagacatcaccaccttcgtcaaggggaaggtctcgggcatcatcgct
gaggagaacaagagcaaagcggcccaggaggacgaggactctggcaagttccgcgaggcc
gagcagaagatgaggaagctatttggcatgcccggcgaggagaagctggtcaactactac
tcctgtagctactggaagggccgtgtgccccgccagggctgggtctacctcagcgtcaac
cacctctgcttctactcctttctcctggggaaagaagtgaccctggtggtgcagtggacg
gaagtgacacgtcttgagaagaacgccacactggtgtttccggagagtgtgcgggtgagc
acacggcacacggaacactacttctccatgttcctcaacataaacgacaccttcaagctc
atggagcagctggccaccattgccatgcgccagctgctggacaacgagggcttctccgcc
gaccgcacgctgcccaaggcatgcaagacgctcaagaacgtctcggcactcaagagggac
ctggacgcacgggccaagaacgaacgctaccgggcgctgttccgcctgaccccggacgag
cgcctggacggacacacagactgcacgctgtggacgcccttcgccaagatgcacattgtg
ggccagctgtttgtctccaacaactacatctgcttctgcagccgtgaggaggacctctgt
cagctcatcatccccctcagagaggtgtccattgtggagaaggcagacagcagcagcgtc
ttgccctgccccgtgtccatcagcaccaagaacaagatgaccttcctcttcgccaacctc
aaagaccgcgacttcctggtccagcgcatctccgacttcctgcagcgcacacctgacaag
ctgtggagcgacggccacccgcttgccctcagtggctattcagtttctcccagccccagt
acgaccccactttcctccagcctccccacacccacgggcgcaggaggggaaccgtcccag
gggcgccactacagtcccagcctgccaacagccacacagggcctgctccgcatctaccag
aaggacgacccagaggaccacgggcccaaagctaccaaggagaaaatgaaagaggagtca
tggaacatccacttctttgagtttggcaggggggtgtgtatgtaccgtacctccaagacc
agagagctggtgctcaacggtatccctgagagcctccgaggggagctgtggctgctcttc
tcaggagctcagaatgagatggccacccaccctggctactatgctgagctggtggagcag
gccatgggccgctgtaccctggccacggaggagatcgagagggacctgcaccgctccatg
cccgagcaccacgccttccagaatgagatgggcatcgctgccctccgcagggtcctcacc
gcctacgcctgccgcaaccctggcataggatactgccaggcgatgaacattgtgacgtcg
gtgctgctgctgtactgtacagaggaggaggccttctggctgttggtggctctgtgtgag
aggatgctgccagactactacaacaccagggttgtgggtgctctcgttgaccaaggcgtg
tttgaggagctgactcgtgagtgcctccccctcctctacgagcacatgcaggagctgggc
gtcatctccaccatctccctctcctggttcctcacgctatttctcagcgtcatgcccttc
gacagcgccgtgctcctggtcgactgcttcttctacgagggcatcaaggtcatcttccag
gtggcactggccgtgctgcacgccaacatggacacgctgctgggctgctccgacgaggga
gaggccatgaccatactcggacggtacctggacaatgttgtcaacaagcagactgtgtct
cctcccattccccacctccacgccctgttgaccagtggtgatgaaccaccaccggagatt
gacgtgttccagctcatcaagtcatcctatgacaagtttggaagtctgcgtgctgatgtc
atcgagcagatgaggttcaagcagaggttaaaggttatccaatcgctggaagacactgcc
aagaggagtgtggtgagggccatcatgaccgactcagcctttagcatcgaggagctagaa
gaactctatgttctcttcaaggccaagcacattatgagctgctactggggggccagctgc
acggcggcggagcgccatgaccccagcctgccctacctggagcagtaccgcatcgacctg
gaacagttctgccagctgttcggggccctgggcacctggctgtgtggcactcacaccgtc
acactggccgctcgccacttccgcctgttggacagcaacaaggacggcctcatcaacttc
aaagagtttgtcacgggcctgagtgggatgtaccatggagacatgacagagaaactgaag
ttactgtacaaactacacctgccaccagcattgtgtccagaggaggctgagtcggcacta
gaggctgcgcagttcttcactgacgatgacagtccacaggaatctcccttcctgtctgat
ctggacttcctggtgcaggaagtgacctcaggagaggagatgaaagaggctggggaagcg
tcgggatgcggagatgcagaggagaagaaagaggtgaaggactataagtattacctgagg
atgtgggccaaggagaaggagcccaagattgagaccattaaagatcttcccaggatgaac
caggagcagttcatagagctgtgtaaaaccctgtacaacatgttcagcgaggacccactg
gagcaggagctctaccacgccatagccactgtggccagcctgctgctgcgcatcggagag
gtgggcaagaagttcaccaacaactgtgccaagaaaccaaccgacaccacctacacccag
ggtcccaccctttccgctgaattgccccagcccgaaaaagaagagtcgaatggggaaagc
agctcaggacagtccctggtctgcaaggctttggcggaggcccagctagaaacgccgccc
cagcagacgtcggacgaagaagtgaaggatgacacgtcggtctcgtcctactccatggtg
agcacgggttcgctgcagtgcgaggacatcgccgatgacacagtcctaattggctgcgcc
ggtgaccagcagcggcgaggcagcacgctggacggcgattggtccatcaccttcgagcag
gtgctggcgtcgatgctcaccgagccgcccctggtggactactttgagaagaagggagac
attcaggcaaggatggcaacctgtaagatgcaaaggggggtggagaggcaggtgagctcg
tcaagtgaccatgagttggcccagctctcgacctga
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integrated database retrieval system
