Oncorhynchus nerka (sockeye salmon): 115129541
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Entry
115129541 CDS
T07952
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129541
Membrane trafficking [BR:
one04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
115129541
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
LRRNT
LRR_9
LRR_LRWD1
V-set
LRR_Zer-1
Receptor_2B4
Big_6
Ig_6
Motif
Other DBs
NCBI-GeneID:
115129541
NCBI-ProteinID:
XP_029515851
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All DBs
Position
LG5:complement(16754074..17122495)
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AA seq
614 aa
AA seq
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MVDCMSKVMLHTALSCWQPFLGLALVAVFVGSALGCPARCDCSAQSKSVLCHRKRLPSIP
DGIPIETRILDLSKNKLQAVNPDDFAPYPGLEDLDLSGNIISYVEPGAFNPLYSMHSLSL
KSNRIKLIPMGVFTGLSNLTRLDVSDNNIVILLDYMFQDLNNLKFLEVGDNDLVYISHRA
FSGLLSLETLTLERCNLTVVPTEALSHLHNLVRLHLRYLSISTLHAYSFKKLFRLRHLEI
DSWTSLDSVPANTLHGLNLTTLFITNTNLSTFPYQAIKHLHYLTLLNLSFNRIRHIEGRM
LSELVHLRELHLVGAQLSTVDPYAFQGLRWLKVFNVSHNRLDTLEKGVFQAPEALEVLLI
DDNPLVCDCRLMWILQRRQSIYFGDSQPECSTPEGIRGRPFREFKETLLSYYVTCTKPKI
RENKTQTIAVDEGQPVRLYCSVEGTPRPVVSWLSPRRRLLTNKSHGRVMVHNNGTLEIKA
AEVQDGGVYLCIATNTAGNDSLMTSLAVKSLGSLYANRTQYYTDPSNATTNGTINVTYGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTSLDGGA
EGEAGPRRFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactgtatgagtaaagtcatgctgcacacggccctctcatgctggcaaccgttc
ctgggactggctcttgtggccgtcttcgtgggttccgcattgggatgtcccgcccgctgc
gactgctcggcccagagcaagtcggtcctgtgccaccgcaaacgcctacctagcatccca
gacggtatccccatcgagaccaggatcctggacctgagcaagaacaagctgcaggccgtc
aacccggatgactttgccccctatcctggtctagaggatttggacctcagtgggaacatt
atcagctatgtggagccgggggccttcaaccctctgtacagtatgcactcccttagtctc
aaaagcaatcgtattaagctcattcctatgggtgtcttcacaggcctgtccaacctcacc
cggttggatgtcagcgacaacaatattgtcatcctgctggactacatgttccaggacttg
aacaatctgaagttcctggaggtgggtgacaatgacctagtgtacatctcccaccgggcg
ttcagtggactgctgagcctagagactctaaccctggagagatgcaatctgacagtggtg
cctactgaggccttgtcccacctgcacaacctggtaagacttcacctgcgatacctcagc
atcagcaccttgcatgcctactccttcaagaagctgttccgattgcgccacctggagatt
gacagctggacctcgctggacagtgtgccggccaacacgctgcacggcctcaatttgacc
acgcttttcatcaccaacaccaacctgtccaccttcccataccaggcgatcaagcacctg
cactacctgacgctcctcaacctgtccttcaaccgcatcagacacatcgaaggcaggatg
ctgtcggagttagtgcacctaagggaactacatctggtcggggctcaattgtcgactgtt
gatccgtacgcatttcagggcctccggtggctaaaggttttcaacgtctcccacaaccgt
ttggacaccctggagaagggtgtcttccaagctcctgaggctctggaggtactcttgatc
gatgacaaccccctggtttgcgactgccgcctcatgtggatcctgcagaggaggcagtcc
atctactttggtgactcgcagccggagtgcagtacccccgagggcatccgcggcaggcct
ttcagggagttcaaggagaccttgctctcctactatgtgacgtgcaccaagcccaaaata
cgggagaacaagacgcaaacaattgccgtagacgaaggtcagccagtgagactgtactgc
agtgttgaggggacccccaggccggtggtgtcgtggctgtccccacgccggcgcctcctc
accaacaagagccacggtagagtcatggtccacaacaatgggacgctggagatcaaggcg
gccgaggtgcaggacggcggggtgtacctttgcattgcaaccaacactgcgggtaatgac
tcattaatgacctccctagcagtgaaaagcctggggtcgctctacgcaaacaggacccag
tactacacagatcccagcaatgcaactaccaatgggactatcaacgtgacctacggcttg
gacctaaagactatcttagtgtcgacagcaatgggttgtttcacattcctgggggtggtt
ttgttctgcttcctcctcctgttcgtttggagtcggggcaaagggaagcataaaaacaac
atagatattgaatacgtacctcggtccaagtctaatggcacctctttagatggaggagca
gagggggaagctggaccccgtcgctttaacatgaaaatgatctaa
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