Oncorhynchus nerka (sockeye salmon): 115129563
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Entry
115129563 CDS
T07952
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115129563
04090 CD molecules [BR:
one04090
]
115129563
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115129563
CD molecules [BR:
one04090
]
Proteins
115129563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Motif
Other DBs
NCBI-GeneID:
115129563
NCBI-ProteinID:
XP_029515913
EnsemblRapid:
ENSONEG00000035008
LinkDB
All DBs
Position
LG5:19896503..20011814
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AA seq
895 aa
AA seq
DB search
MWKTGLLLLFWGLLTSGELQQEETEPERRSLPPSGKLDFGYVPQGVYQTLAYYEPGVIGL
LFHMVHAFLYVVQPNPFPEDLVIKVAKDKFGAIQSEYQKPENIVLTLQAIYYETGFVVCA
VLGLLFMVLLPLVGLFFCLCRCCDNCGGEMHQRQRKNADCQRGLLTTLLFATSLVITAGV
LCAYAANQNLSSQLKGMRRLVSSNLRDLQSFTNETPTQVDYLIAQYATAKNKVISDLDNV
GPLLGGKIHEELGKEVCPAMDGALHMAGVKVERAIKAMRETKDALENVSMSLEVLQEATG
KLHFNLSLVRFSLNRTLNDPGCNDEDSDATTAQLCLSIRSSLAQLHVSANFTRLPDMNNQ
LESVNQLMKTDLSNIVQKGYSSFNDTPGMVSDQMRNVFEGARGMLDIIGTNISSFSKVFP
VHSTMANFTNFISHTHSKIEDSYPEIDQIDFYRWICCIGLCCMVVLILAFNFLAILCGTI
GYDKHASPTTRGCVSNTGGTLLMAGVGFSFLFSWILMGVVTATFLVGGNLEKLVCEPFHT
KQLFKVLDTPHLVNPEWRNFIPGYMYNDSDLDLTVESLYSNCKENRGIYSAMRLDKVFNV
TPFLNSSLYTKEVGKMFNDVKIDLRVIVLLESEGKQNLIGFSETGVNRINYAAYLEEVNK
GVTQVDLLSYANELEAQTDLMPKGPLQTSLKGHANSLRQIHSQQVVPMEQAMKYVRARSM
LNQSIRLLERTASDLPNKVADVLATIEAAQYLISQNATQVVNQETEKYKQTIVGYFRQYI
EWVRTSLTMEVAACKPFSNIVDTVEIIACSFLVDSLNTFWFGLGCCALFLLPSIILSVKL
AKFYRRMDTEDVYDEIGQTAVNVHVILLLRERQKERQACLLWCGATETTAHVTNF
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaaccggtcttcttctcctcttttggggactattaacgtctggtgaactccag
caagaagaaacggagccagagcgccgaagtctgccaccgtcgggaaagttggattttggc
tatgtgcctcagggagtttaccaaaccctcgcctattacgaacctggagtaatagggtta
ctgttccacatggtgcacgctttcctatacgtcgtgcagcccaacccgttcccggaagat
ctcgtcatcaaagtcgccaaggataaatttggagccattcagtcggagtatcagaagcca
gagaacattgttctgacgctccaggccatctactatgagacaggtttcgtggtgtgtgct
gtgctcggcctgctcttcatggtcctgctgcccctggtcggcctcttcttctgcctgtgc
cgctgctgcgacaactgtggtggcgagatgcaccagcgccagcggaagaacgcagactgc
caacggggcctgctcaccacactgctcttcgccacctcgctcgtcatcacggctggagta
ctgtgtgcgtatgcagctaaccagaacctgagctcacagctcaaaggcatgaggagattg
gtcagtagcaacctgagggacctgcagagttttaccaacgagacgccaacgcaagttgat
tatctaatagcacaatacgccactgccaagaacaaagtcatttctgacttggataatgtg
ggtcctctgcttggagggaagatccatgaggaattggggaaagaggtctgtcctgcaatg
gacggagcgctccatatggctggtgtcaaagtggagagggccattaaagccatgcgggag
accaaagacgccctggagaacgtgagtatgtctctggaggttctccaggaggcgacaggg
aagctccacttcaacctgagcctggtgcgcttcagcctcaatagaaccctcaacgacccg
ggctgcaacgacgaggactcggacgccaccaccgcccagctctgcctctccatccgtagc
tccctggcacagctccacgtcagcgccaacttcacccggttacctgatatgaacaatcag
ctggaaagtgtgaatcaattgatgaaaacggacctcagcaatatcgttcaaaagggctac
tcctcattcaatgacactccaggcatggtgagtgaccagatgaggaacgtattcgaggga
gcccggggcatgttggacatcatcggcaccaacatcagcagcttctccaaggtgttccct
gtacacagcactatggccaactttaccaacttcattagtcacacacactccaagatagaa
gactcctaccccgagatcgaccagatcgacttctacaggtggatttgctgtattggcctg
tgctgcatggtggttctcatccttgctttcaacttcctggccatactgtgtggcaccata
ggctatgacaagcacgcctcccccaccacacggggctgtgtctccaacaccggcggcacc
ctgcttatggccggtgtgggcttcagcttcctcttctcctggatactgatgggagtggtg
accgccacctttctggtcgggggcaacttggagaagctggtctgcgagcccttccacacc
aagcagctcttcaaggttttggacactcctcacctggtgaaccctgagtggaggaacttc
atcccagggtacatgtacaacgactcagacctggatctcacagtggagagtctctacagt
aattgcaaggagaacagaggtatttactctgccatgcgcctggacaaagtcttcaatgtc
acacccttcctaaactctagcctgtacaccaaggaggtggggaagatgtttaacgatgtg
aagattgacctgagagttatcgttctgctggagtctgaggggaagcagaacctcattggc
ttctctgagacgggcgtcaacaggatcaactacgcagcctatctagaggaggttaacaaa
ggggtgactcaggtggacttgctgtcgtacgccaatgagctcgaggcacagacagacctt
atgcccaaggggcccctccagacctctctaaagggccacgccaacagtctccggcagatc
cacagtcagcaggtcgtccctatggagcaggccatgaaatatgttagagcgaggagtatg
ctgaaccagagcatcagactactggagaggacggcctcagacctgccgaacaaagtcgcc
gatgtactggcgaccatcgaagcagcgcagtatctcatctcccagaatgccacacaagtc
gtcaaccaggaaacggaaaagtacaagcaaaccattgttggttatttcaggcaatacata
gagtgggtcaggacttctctgaccatggaggtagcggcttgcaaacccttcagcaacatc
gtggacacagtggagatcatagcctgcagcttcttggttgactcattgaacacattctgg
tttggcctaggctgctgtgccctattcctccttcctagcatcatcctgtcagtaaaactg
gcaaagttctaccgtagaatggacacagaggatgtttacgatgaaattgggcaaactgct
gtgaatgtacacgtgatccttttgctccgagagaggcaaaaagagaggcaagcatgtctg
ctttggtgtggtgctactgagacaactgctcatgtgacgaacttctaa
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