Oncorhynchus nerka (sockeye salmon): 115129600
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Entry
115129600 CDS
T07952
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115129600
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
115129600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
115129600
NCBI-ProteinID:
XP_029516005
LinkDB
All DBs
Position
LG5:complement(23524136..23607631)
Genome browser
AA seq
2168 aa
AA seq
DB search
MMAAFGILSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSA
KNVNFNPSKISSNFSSIIAEKLRYNTFPDTGKRKPQVNQKDNFWLVTARSQSSINNWFTD
LAGTKPLTQLAKKVPIFSKKEEVFGYLAKYTVPVMRSAWMIKMTCAYHAAITETKVKKRH
VIDPCIEWTQIITKYLWEQLQKVAEFYRQSPSQGCGSHLPATSAEVDTAMKQWEYNEKLA
MFMFQDGMLDRHEFLTWVLECSEKVRPGEDELLKLLLPLLLQYLGEFVQSAYLSRRLAYF
CTRRLNLLLSDGSLGPGAGGHPAHSILAQPGNALPPMPTSQPAGGNQPQTPFTDFYICPQ
HRPLVFGLSCMLQSIMLCCPSALVWHYSLTDSRNKTGSPLDLLPISPSNLPMPGGNGTFT
QQVRAKVREIEEQVKDRGQAVEFRWSFDKCQETTAGFTIGRVLHTLEVLDNHSFEKSDFS
NSLDSLYNRIFGSGQNKDGHEMSPDDDAVVTLLCEWAVCCKRSGRHRAMVVAKLLEKRQA
EIEAERCGESEVVDEKGSVSSGSLSAATLPVFQDVLLQFLDTQAPVLTEPSNESERVEFS
NQVLLFCELIRHDVFSHNIYMCTLISRGDLASDSHLPRPRSPSDEPSDESERKEAGSSVK
NEDTGLSESMEIDHNSSTNFDEMFSPPMHCESKGSPSPEKTAQDPAFPLVYEQPRHIQYA
THFPIPQEESASHECNQRLVVLYGVGKQRDEARHAIKKITKDILKVLNRKSTAETGGDEG
QKRKRSKPEAFPTAQDIFSKFQHLSHFDQHQVTSQVSRNVLEQITSFALGMSYHLPLVQH
IQFIFDLMEYSLNISGLIDFAIQLLNELSLVEAELLLKSSSLVGSYTTGLCLCIVAVLRR
YHSCLILNPEQTAQVFDGLRIVVKSGVNPADCSSAERCILAYLYDLYTSCSHLKSKFGEI
FSEFCSKVKNSIYCNIDPSDSNMLWDPVFMMEAIANPSAHNFNHSMVGKILNDSPANRYS
FVCNVLMDVCVDHRDPERVNDIGILCAELTAYCRSLSAEWLGVLKALCCSSNNGNCGFND
LLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLVRCVAIPSLLNAACSEQDSEPGARLT
CRILLHLFKTPQRNPCPQDGAKSDKSSVGIRSSCDRHLLASSQNSIVVGAVFAVLKAVFM
LGDAELKGSGFSHPAGLDDDDIGSKKSGGHTVSIETASLDMYAKYVLKSICQQEWVGERC
LKSLSEDSSALQDPVLVNIQAQRLLQLICYPHRQLDSEEGDNPQRQRIKRILQNMDQWTM
RQSSLELQLMIKQSTNNELYSLLESIAKVTIEVFQKSAEMNSNNPSGNSSAGAGSSTSNS
NNTSKMKPVLSSSERTGVWLVAPLIAKLPTSVQGHVLKAAGEELEKGQHLGSSSRKERDR
QKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQIVTNWREDQYQDDCKAKQ
MMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTVDMKSNNELFTTVLDMLS
VLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSESLEKVRQLLPLPKQTRD
VITCEPQGSLIDTKGNKIAGFEKEGLQVSNKQKISPWDVFEGLKHSAPLSWGWFGTVRVD
RKVTKFEEQQRFLLYHTHLKPKPRSYYLEPLPLPPEEEEPPTPVPQELEKKMVEALKPEK
SVPVVSSDVTKKKPKKKKTPSTSKTEDFVTRTQGGVPYGTGLPPEILMGQQTHPYNRLGY
SQQAMGMYAQNQPLPPGGPGLDTPYRPTRNPQMGKMMPTRPNYPGVMPGGMPGMMGMEKQ
YPMGYKPQPNIPQGQILRQHLQVRLNQSIIGQQMRQMTPNQQYGSVQSTQNISQGYTTYG
SHMGMQPHPSQVGGIVPPSYGNQGFQGSHPGANLGVVDSLRQMVQRPSGYVHQQAPGYSH
TMQNTQRFPHQSIHQAPVMQGLSHMGTQGVHPGMRPNQMLAEQQQAQQQQQQYLRQQALR
RTSGLNGIAGPTGRPAAGSAASSTTTGSTTASSTATSGPAPTSSAAATTTTTTAASSVST
ALRCPGSEPGPGHAAHAPTATHVPTTGDATDSTAAADCSTGQAAPTTTLKYTTWTEHQLI
LLIVLVVY
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcttttgggatcctgagttacgaacaccggccactgaagcggccacgactc
ggacctccggacgtttatcctcaagacccaaagcaaaaagaggatgaattgactgcgttg
aatgtgaagcaaggatttaataatcaaccggcagtgtcaggggatgaacatggaagtgct
aaaaatgtcaactttaatccctcaaagattagttcaaatttcagcagcatcattgcagag
aagctgcgctacaacacatttccagacacaggcaaacggaagccgcaggttaaccagaag
gacaatttctggctcgttactgccaggtcacagagctctatcaacaactggtttacagat
ttggccggaactaaaccactcacccagctggcaaagaaggtgccgatctttagtaaaaag
gaggaggtttttggctacttggccaagtacacagtacctgtgatgcgctcagcatggatg
atcaagatgacctgtgcgtatcacgccgccattacagaaacaaaagtcaagaagcggcac
gtgattgacccctgcatagaatggactcagatcatcacaaagtacctgtgggaacagttg
cagaaggtggccgagttctaccgccagtctcccagccagggctgtggctctcatctcccg
gccacctcggccgaggtggacacagccatgaagcagtgggagtacaatgagaagctggcc
atgttcatgttccaggatggcatgctagacagacacgagttcctcacgtgggtgttggaa
tgctccgagaaggtccgacctggagaggacgagcttctgaagctgctactgcccctcctg
ctacagtacttaggggaatttgtgcagtcggcctacctgtcccggaggctggcctatttc
tgcacgcgacgcctcaacctgctgctaagtgacgggagcctggggcccggcgccggggga
cacccggcccacagcatcctggcacagccagggaacgccctgccccccatgcccacctcc
cagcccgcagggggaaatcagccccagaccccatttacagacttctacatatgccctcaa
cacaggcccttggtgtttgggctcagctgcatgctacagagtattatgctgtgctgtccc
agtgccctggtgtggcactactctctgacagatagccggaacaagactggttccccactg
gacctattgcccatctccccctccaacctgcccatgccagggggcaacggcacctttaca
cagcaggtccgcgcaaaggtgcgagaaatagaggagcaggtcaaggaccgagggcaggct
gtggagttccgctggtcctttgataaatgtcaggagacaactgctggcttcaccattggg
agggtcctacacaccttggaggttctagacaaccacagctttgagaagtcagacttcagc
aattccctggattccctttacaaccgcatctttggctcgggccagaacaaagacggtcac
gagatgtcccctgatgacgacgcagtggtgaccttgctgtgtgagtgggcggtgtgctgc
aagaggtctggccgccacagggccatggtggtggccaagctactggagaagagacaggcg
gagatcgaagccgagaggtgcggtgagtcagaggtggtggatgagaaaggctcggtgtca
tcgggctctctctcggcggccaccctgcctgtgtttcaggacgtgctcctacagttcctg
gacactcaggcccccgtgctcactgagccgagcaacgagagcgagcgcgtggagttctcc
aaccaggtgctgctcttctgcgagctcatccgccacgatgtcttctcccacaacatctac
atgtgcacgctcatctcccgcggcgaccttgcctctgactcccacctgcctcgcccccgt
tcccctagcgatgagccctcggatgaatcagagcgcaaggaggctggcagcagtgtcaag
aatgaggacactggtctctcagagtcaatggagattgatcacaactcgagtactaatttc
gatgagatgttttctccccccatgcactgtgagtcaaagggcagcccctcccccgagaag
actgcccaggatcctgcctttccattggtgtacgagcagccccgccacatccagtatgcc
acccacttccccatcccccaggaggagagtgccagtcacgagtgcaaccagcgcctggtg
gtgctctacggcgtgggaaagcagcgagacgaagcaagacacgccatcaagaaaatcacc
aaagacatcttgaaggtgctcaaccgcaaaagcacagcagagaccggaggagatgaagga
cagaagaggaagaggagtaagcccgaggccttccccacagcacaggacatcttctccaaa
tttcagcacctctcccactttgaccagcaccaggtcacctctcaggtgtccaggaatgtt
cttgaacagatcaccagctttgccttagggatgtcctatcacctgcccctggtccaacac
atccagttcatatttgacctcatggagtactcccttaacattagtggcctcatcgacttt
gccattcagctgctgaacgagctgagcttggtggaggcagagctgctgctcaagtcgtcc
agcctggtgggcagctacaccacgggcttgtgtctgtgcatcgtggccgtgctgcggagg
taccactcctgcctcatcctcaaccccgagcagacggcgcaggtctttgacgggttgcgc
atcgtggtgaagtcaggggtgaatcctgcagactgctcctcagctgagcgctgcatcctg
gcctacctgtatgacctctatacctcctgcagtcacctcaagagcaagtttggagagatc
ttcagtgagttctgctccaaggtaaagaactccatctactgtaacatcgacccgtcagac
tccaatatgctgtgggaccctgtgttcatgatggaggccatcgccaacccgtcggcccac
aacttcaaccacagcatggtgggtaagatcctcaacgacagccccgccaatcgctacagt
tttgtctgcaatgtcctcatggatgtgtgcgtggaccaccgggaccccgagagagtgaat
gacattgggatcctgtgtgcggagctgactgcgtactgtcgctctctgagtgctgagtgg
ctgggcgtcctcaaggccctctgctgctcctccaacaatggcaactgtggcttcaatgac
ctgctgtgcaacgtggacgtcagcgatctctccttccatgactccctggccaccttcgta
gccatcctcattgcccgtcagtgtcttctcctggaggacctggtccgctgcgtagccatc
ccttccctcctcaacgctgcctgcagtgagcaggactctgagcccggagcccgtctgacc
tgcaggattctgctgcaccttttcaagaccccgcagcgcaacccctgcccccaggatgga
gccaagtcagataaatcttctgttgggatccggtcgtcgtgtgatcgccaccttctggct
tcctcgcagaacagcatagtggtcggagctgtctttgctgtcctaaaggctgtctttatg
ctgggcgatgcagaactgaagggctcgggattttctcaccccgccggcctcgacgacgac
gacataggttccaagaagtcgggcggccacacagtctctatagagacggccagcctagac
atgtacgccaagtatgtgctgaagagcatctgccaacaggagtgggtgggcgagcgctgc
ctcaagtccctgtcggaggacagcagtgccctgcaggacccggtgctggtcaacatccag
gcccagcggctgctgcagctcatctgctaccctcaccgccagctggacagtgaggagggg
gacaatccccagaggcaacgcatcaaacgcatcctccagaacatggaccagtggacgatg
agacagtcgtccctggaactgcagctcatgatcaagcagagtactaacaacgagctgtac
tccctattggagagcatcgccaaggtcaccatagaggtgttccagaagtcagcggagatg
aactccaacaacccctcaggaaacagctcggccggcgccggaagctctacctccaacagc
aacaacactagcaagatgaaaccagtgttgagttcgtcagagcggacaggtgtgtggctg
gtggcaccactgattgccaagctgcccacctcagtccagggccacgtcctgaaggcggca
ggggaggagttggagaagggccagcatctgggatcctcctcacgcaaggagagggaccgg
cagaaacagaaaagcatgtctctgctgagccagcagcctttcctatctctggtgctaacc
tgtctaaaaggccaggacgaacagcgagagggcctcctcacctccctctacagccaggtg
cagcagattgtaacaaactggcgggaggaccagtaccaggatgactgcaaggccaagcag
atgatgcacgaggcactgaagctgcggctcaatctggtaggtgggatgtttgacacggta
caacgcagcacacagcagaccaccgagtgggccgtgctactcctcgacatcatcagcagc
ggtacagtggacatgaagtccaacaatgagctcttcactacggtactggacatgctgagt
gtgctgattaatggcacgctggctgctgacatgtccagcatctctcagggcagcatggaa
gagaacaagagggcttacatgaacctggtaaagaagcttcggaaagagctgggtgaccgg
cagtcagagagtctggagaaggtgcggcagctgctccctctgcccaagcagactcgtgat
gtcatcacgtgtgaacctcagggctcgctcatcgacaccaagggcaacaagattgccggc
tttgagaaggagggcctccaagtgtccaacaagcagaagatctcaccgtgggacgtgttc
gagggcctcaagcactctgcccctctctcttggggctggttcgggacggtgcgcgtggac
cgtaaggtgaccaagttcgaggagcagcagcgcttcctcctctaccacacccacctgaag
cccaagccgcgcagctactacctggaacccctccccctgccacctgaggaggaggagccg
cccacacctgtgccccaggagctcgagaagaagatggtggaggcattgaagccggagaag
agcgtccctgtggtgtcgtccgacgtgaccaagaagaagcccaagaagaagaagacacca
tccaccagcaaaactgaggactttgtgacacgtacccagggtggagtgccttatgggaca
ggtttgcccccagagatcctcatgggccagcaaactcacccctacaacaggttaggctac
agccagcaggccatgggcatgtatgcccagaaccagcctctacctccagggggccctggt
ttggacaccccgtaccgaccaacccggaaccctcagatgggcaagatgatgcccacgcgg
cccaactacccgggtgtgatgccaggtggcatgcctggcatgatgggcatggaaaagcag
taccctatgggctataagccccagcccaacataccgcagggccagatcctgcgccagcat
ctgcaggtcagactgaaccagagtattattggacaacagatgcgacagatgactcccaac
caacaatacggctccgtgcagtcaactcagaacatctcccagggctataccacgtacggc
tcccacatggggatgcagccgcatccctcccaggtgggtggtatagtccctccgtcgtac
gggaaccagggtttccagggaagccacccgggggccaacctgggtgtggtggactctctg
aggcagatggtacagaggcccagcggctacgttcaccagcaggcaccgggctactcgcac
accatgcaaaacacacagaggtttccccaccagtccatccatcaggctcccgtcatgcag
ggcctgagccacatgggtacgcagggggtccacccgggaatgagaccaaaccagatgctt
gctgagcagcagcaggcccagcagcaacagcagcagtacctcagacagcaggcactccga
aggaccagcggattgaatgggatcgcgggacccacaggccgcccagcagcaggctcagca
gcaagctcaacaacaacaggttcaacaacagcaagttcaacagcaacatcaggtccagcc
ccaacaagttcagcagcagcaacaacaaccacaacaacagcagcaagtagcgtcagcacc
gccctccggtgcccaggctcagaaccaggccctgggcatgcagcccatgcccccacagca
acccatgttcccacgacaggggatgcaacagactcaacagcagcagcagactgcagcact
ggtcaggcagctccaacaacaactctcaaatacacaacctggacagaacaccaactcata
ttactgatagtgcttgttgtatattag
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