Oncorhynchus nerka (sockeye salmon): 115129604
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Entry
115129604 CDS
T07952
Name
(RefSeq) neural cell adhesion molecule 2-like isoform X1
KO
K06491
neural cell adhesion molecule
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
one04514
Cell adhesion molecule (CAM) interaction
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
115129604
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115129604
04517 IgSF CAM signaling
115129604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129604
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115129604
04090 CD molecules [BR:
one04090
]
115129604
00536 Glycosaminoglycan binding proteins [BR:
one00536
]
115129604
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
115129604
04091 Lectins [BR:
one04091
]
115129604
Membrane trafficking [BR:
one04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
115129604
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
NCAM1/2
115129604
CD molecules [BR:
one04090
]
Proteins
115129604
Glycosaminoglycan binding proteins [BR:
one00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
115129604
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
Others
115129604
Lectins [BR:
one04091
]
I-type lectins (Siglecs)
115129604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
Ig_PDGFR_d4
Ig_6
C2-set_2
Ig_MYOM1
Pur_ac_phosph_N
Fn3_ROS1
Ig_C17orf99
Izumo-Ig
Ig_5
Adeno_E3_CR1
C2-set_3
F22D3_4_N
C2-set
Motif
Other DBs
NCBI-GeneID:
115129604
NCBI-ProteinID:
XP_029516010
LinkDB
All DBs
Position
LG5:24782644..25220932
Genome browser
AA seq
839 aa
AA seq
DB search
MIIQLLWFLVCGSQAVLQVSISLNKVELSVGESKFFKCTVIGEPVNLEWFNPQGERIVSS
QRVALHTGEDSSRLTIYNAEVEDAGIYRCQATDAQGQTQEATMVLEMYQKLTFRNVRSPQ
EFRHDEAAEVVCDVIASPAPAVTWFYQKGFRSMEITEEHYSRFQVLPNNNLQIHKVTKAD
EGVYRCEARVEARGEIDFVDIEVVVNVPPVLSVLQQSFNATADYQESVTFTCITSGSPNP
EVTWHRKGQQLERSEQYVLITMEAGRSTLTIRNIIQGDGGDYTCRATNKAGAEERELFLK
VFVQPHITQLRNVTAVEGSAAMISCVAEGEPLPEISWRRASDGQSFADGDKSQDGRVDVR
GRHGKSMLTISGVKLTDLGRFDCEALSRIGGHQKSMFLDIEYMPKFQTNQTIFYSWEGNP
VNISCDVKSNPPATMLWRRERLTISAEGTANTRIHTTDSKSLLEVTPVSDRDFGRYNCTA
RNNIGVKYQEFILAQADVPSNPYSVRLSAVSQRIATVTFMKPDSHGGVPIGHYLVNYKEV
GSQDWRDVKSHGVQTIVLLTGLEPNTTYEVRVAAVNGKGQGEFSHTESFQTLPIREPSPP
AVHGQRGMGKTYRLGLVKQDDGGMPIVEYIVKYKTDKEEQWMTKLVSGQHDFALLQPLQW
NMRYEVEITARNVKGLSEPTFYQFFMPQKPDIIADSLFSGLGLGPVVGLGLVGVLLVLVV
VDVSCYFLRQCGLLMCITRKLCSKKTTTSGKSKEMEEGKAAYLGDGSKDPIVEMRTEEER
ITNHDGSPVHEPNETTPLTEPEKLPLKEENGKETLKPDMIEIKVHSDNSIHTKRDDSKA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgattatccaactcctatggtttcttgtctgcggcagtcaagctgttctgcaggtatcc
atatccttgaacaaggtggagctaagtgtgggagagtccaagttcttcaaatgcacagtg
atcggagagccggtcaacctggagtggtttaacccccagggggagcgcatcgtgtcgtcc
cagcgtgtggccctgcacaccggggaggacagctccaggctgaccatctataatgctgag
gtggaggacgcgggcatctaccgctgccaggccaccgacgcccagggacagacacaggag
gccaccatggtgctggagatgtaccagaagctgacgttccgcaacgtgaggtccccccag
gagttccgtcacgacgaggcggcagaggtggtgtgtgatgtcatcgcctccccggcaccc
gcggtcacttggttctaccaaaagggcttcaggagcatggagatcacagaggagcactac
agcaggttccaggtgctgcccaacaacaacctgcagatccacaaggtgaccaaggcagac
gagggcgtgtaccgctgcgaggcgcgagtggaggcccgcggcgagatcgactttgtcgac
atcgaggtggtggtgaatgttcctcctgtgctgtcggtactacagcagtcattcaatgcc
acagcagattaccaggagtcagtgactttcacctgcatcacatcaggatcccccaacccc
gaggtcacctggcacaggaagggccagcagttggaaaggtcagagcaatatgtcctcatc
accatggaggcaggcaggagtaccctgaccatccgcaacatcatccagggggacgggggc
gactatacctgccgagccaccaacaaggccggggcagaggagagggagctcttcctcaaa
gtgttcgtccagccacacatcacccagctgcgtaacgtgacggcggtagagggcagcgcc
gccatgatctcctgcgtggctgagggggagccgctccctgagatctcctggaggagagcc
agtgacggtcagagtttcgccgatggagacaagagccaggatgggcgtgtggacgtgcgg
ggccgccatggcaagtccatgttgaccatcagtggggtgaagctaactgacttaggccgt
tttgactgtgaggccctcagcaggatcgggggccaccaaaagagcatgttcctcgatatc
gagtacatgcccaagttccagaccaaccaaaccatcttttactcgtgggagggcaaccca
gtaaacatcagctgtgacgtcaagtccaacccgcccgccaccatgctgtggaggagagaa
cgcctcaccatctcagccgagggcactgccaacacacgcatccacacgactgacagcaag
tccctgctagaggtcaccccagtgtccgacagggatttcggacgctacaactgcacggcc
cggaacaacatcggagtgaaataccaggagttcatcttggcccaggcagacgtgccctcg
aacccgtactctgtgcgcttgtcggccgtgtcacagcgcatcgccacggtgacattcatg
aaacccgactcacatggcggtgtacccattggccactacctggtcaactacaaagaagtg
ggctcgcaggactggagagacgtcaagtcacatggcgtccagacaatagtactgctgaca
ggcctagagcccaacaccacctacgaagtgcgagtggctgcagtcaatgggaagggccag
ggggagttcagtcacacggagtccttccagactttacccatacgtgagcccagccctccg
gcagtgcatggccagagagggatgggaaagacctaccggctgggtcttgtcaagcaagac
gacgggggcatgcccatcgtggagtacattgtcaagtacaagacagacaaggaggagcag
tggatgacgaagctggtgtcggggcagcatgactttgcgctgctgcagccgctgcagtgg
aacatgcgctacgaggtggagatcacagctcgcaacgtcaagggcctttcggagcccacc
ttctaccagttcttcatgccccagaaacccgacatcatagcagactccctgttcagcggc
ctagggttggggccagtggtgggcctgggcctggtcggcgtcctcctggtcctcgtagtg
gtggacgtcagctgctacttcctgcgccagtgtggcctgctcatgtgtatcacgcgcaag
ctctgcagcaagaagacgaccaccagcggcaagagcaaggagatggaggagggcaaggcc
gcctacctgggcgatgggtccaaggatcctatcgttgagatgagaacggaagaggagaga
ataactaaccacgatgggagcccagtgcacgaacccaacgagactacacctctcacagag
ccagagaagctaccgctgaaggaggagaacgggaaggagacgctcaagcccgacatgatc
gagatcaaagtgcacagcgacaacagcatccacacaaagcgggacgacagtaaagcataa
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integrated database retrieval system
